RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 RDH5Q92781 318 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 GPA33Q99795 319 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 PPP1R3EQ9H7J1 279 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 NAA60Q9H7X0 242 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 PPP1R3CQ9UQK1 317 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 PRRC2BQ5JSZ5 2229 aaKnown RBP13.04□□□□□ -0.32
SNPH-203ENST00000614659 TRAV20A0A0B4J274 112 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 NQO2P16083 231 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 IGFBP7Q16270 282 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 ZNF787Q6DD87 383 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 ADPRHL1Q8NDY3 354 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 OR4F5Q8NH21 305 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 AKR7LQ8NHP1 331 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 OR4F4Q96R69 305 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 MRPL22Q9NWU5 206 aaKnown RBP13.04□□□□□ -0.32
SNPH-203ENST00000614659 SPRY1O43609 319 aaPredicted RBP13.04□□□□□ -0.32
SNPH-203ENST00000614659 CSF2RBP32927 897 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 PPP1CAP62136 330 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 SUMO1P63165 101 aaKnown RBP13.04□□□□□ -0.32
SNPH-203ENST00000614659 PJVKQ0ZLH3 352 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 CHAC2Q8WUX2 184 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 RAB1CQ92928 201 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 SLC35E1Q96K37 410 aa13.04□□□□□ -0.32
SNPH-203ENST00000614659 ALX4Q9H161 411 aaPredicted RBP13.04□□□□□ -0.32
SNPH-203ENST00000614659 PLXNA1Q9UIW2 1896 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 LINC00862A6NCI5 91 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 ST8SIA5O15466 376 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 PDCD6O75340 191 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 CNIH1O95406 144 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 ZNF17P17021 662 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 C1QTNF12Q5T7M4 302 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 KDF1Q8NAX2 398 aaPredicted RBP13.03□□□□□ -0.32
SNPH-203ENST00000614659 RASL10BQ96S79 203 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 RER1O15258 196 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 RPS4Y1P22090 263 aaKnown RBP13.03□□□□□ -0.32
SNPH-203ENST00000614659 SRP14P37108 136 aaKnown RBP13.03□□□□□ -0.32
SNPH-203ENST00000614659 BHLHA15Q7RTS1 189 aaPredicted RBP13.03□□□□□ -0.32
SNPH-203ENST00000614659 SAT2Q96F10 170 aaPredicted RBP13.03□□□□□ -0.32
SNPH-203ENST00000614659 RNASEK-C17orf49H0YIS7 233 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 CST2P09228 141 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 FZD5Q13467 585 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 LCN15Q6UWW0 184 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 RNF133Q8WVZ7 376 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 RAB40CQ96S21 281 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 TMPRSS13Q9BYE2 586 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 IGKV1-8A0A0C4DH67 115 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 OR10J4P0C629 311 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 FSTP19883 344 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 COTL1Q14019 142 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 OR13G1Q8NGZ3 307 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 RXFP4Q8TDU9 374 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 ZCCHC14Q8WYQ9 949 aaKnown RBP13.03□□□□□ -0.32
SNPH-203ENST00000614659 SLC26A1Q9H2B4 701 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 SDK1Q7Z5N4 2213 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 G3V3Q6 166 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 COX6B1P14854 86 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 HNF1AP20823 631 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 SLC25A42Q86VD7 318 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 GALMQ96C23 342 aa13.03□□□□□ -0.32
SNPH-203ENST00000614659 ALKBH3Q96Q83 286 aaPredicted RBP13.03□□□□□ -0.32
SNPH-203ENST00000614659 GPANK1O95872 356 aa13.02□□□□□ -0.32
SNPH-203ENST00000614659 MLF1P58340 268 aa13.02□□□□□ -0.32
SNPH-203ENST00000614659 C4orf17Q53FE4 359 aa13.02□□□□□ -0.32
SNPH-203ENST00000614659 FAM162BQ5T6X4 162 aa13.02□□□□□ -0.32
SNPH-203ENST00000614659 TSEN54Q7Z6J9 526 aaKnown RBP13.02□□□□□ -0.32
SNPH-203ENST00000614659 C1orf174Q8IYL3 243 aa13.02□□□□□ -0.32
SNPH-203ENST00000614659 GNRHR2Q96P88 292 aa13.02□□□□□ -0.32
SNPH-203ENST00000614659 FAM103A1Q9BTL3 118 aaKnown RBP13.02□□□□□ -0.32
SNPH-203ENST00000614659 PECRQ9BY49 303 aa13.02□□□□□ -0.32
SNPH-203ENST00000614659 DEFA4P12838 97 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 DVL1P1P54792 670 aaPredicted RBP13.02□□□□□ -0.33
SNPH-203ENST00000614659 CEBPEQ15744 281 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 SPANXN5Q5MJ07 72 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 OR5B21A6NL26 309 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 J3QR89 54 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 SP1P08047 785 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 OR3A4PP47883 348 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 OTPQ5XKR4 325 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 SSX7Q7RTT5 188 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 OR8B12Q8NGG6 310 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 SMIM7Q9BQ49 75 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 TMPRSS5Q9H3S3 457 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 ZNF236Q9UL36 1845 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 K7EQM0 130 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 WDR1O75083 606 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 EML2O95834 649 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 FGF7P21781 194 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 NCR3LG1Q68D85 454 aa13.02□□□□□ -0.33
SNPH-203ENST00000614659 PHOX2AO14813 284 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 MMP16P51512 607 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 CMTM2Q8TAZ6 248 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 SCARF2Q96GP6 870 aaPredicted RBP13.01□□□□□ -0.33
SNPH-203ENST00000614659 AKR1E2Q96JD6 320 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 SHARPINQ9H0F6 387 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 FAM234AQ9H0X4 552 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 SHISA8B8ZZ34 492 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 FOXS1O43638 330 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 VAMP3Q15836 100 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 BTNL3Q6UXE8 466 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 KLHDC1Q8N7A1 406 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms