RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 CCR6P51684 374 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 RAG2P55895 527 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 IL24Q13007 206 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 OR8G1Q15617 311 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 TAF9Q16594 264 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 ALKBH6Q3KRA9 238 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 FAM76BQ5HYJ3 339 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 AGAP6Q5VW22 663 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 RGS7BPQ6MZT1 257 aaPredicted RBP7.6□□□□□ -1.19
CCDC47-207ENST00000612558 STEAP1BQ6NZ63 245 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 HAGHLQ6PII5 290 aaPredicted RBP7.6□□□□□ -1.19
CCDC47-207ENST00000612558 C22orf34Q6ZV56 151 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 BTN2A1Q7KYR7 527 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 FBXL14Q8N1E6 418 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 OR4C16Q8NGL9 310 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 CHAC2Q8WUX2 184 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 NUDCD2Q8WVJ2 157 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 ST8SIA4Q92187 359 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 SLAMF9Q96A28 289 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 PECRQ9BY49 303 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 PKIBQ9C010 78 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 OR51I2Q9H344 312 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 IFT46Q9NQC8 304 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 NUDT15Q9NV35 164 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 HSF4Q9ULV5 492 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 OSGIN2Q9Y236 505 aa7.6□□□□□ -1.19
CCDC47-207ENST00000612558 TRAV6A0A075B6T7 132 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.59□□□□□ -1.19
CCDC47-207ENST00000612558 LRP5LA4QPB2 252 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A10PA6NDY2 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A18PA6NE21 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A16PA6NEW6 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A20PA6NIJ5 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A8PA6NJQ4 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A7PA6NKC0 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 TMEM210A6NLX4 147 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A22PA8MWA6 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A12PA8MX19 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A5PA8MXJ8 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A23PA8MXZ1 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 CCL21O00585 134 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 GEMIN2O14893 280 aaKnown RBP7.59□□□□□ -1.19
CCDC47-207ENST00000612558 TIMM8AO60220 97 aaPredicted RBP7.59□□□□□ -1.19
CCDC47-207ENST00000612558 SSX5O60225 188 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 DHFRP00374 187 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 CD74P04233 296 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A15PP0C7V4 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A13PP0C7W8 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A14PP0C7W9 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAM90A24PP0C7X0 464 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 PPP3CBP16298 524 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 BCL3P20749 454 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 PTAFRP25105 342 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 CD40P25942 277 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 NPBWR2P48146 333 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 RBM11P57052 281 aaKnown RBP7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FGF12P61328 243 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 NKX6-1P78426 367 aaPredicted RBP7.59□□□□□ -1.19
CCDC47-207ENST00000612558 ARFRP1Q13795 201 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 TATDN3Q17R31 274 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 NHLRC3Q5JS37 347 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 SIGIRRQ6IA17 410 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 FAAP20Q6NZ36 180 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 SEZ6L2Q6UXD5 910 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 ZNF782Q6ZMW2 699 aaPredicted RBP7.59□□□□□ -1.19
CCDC47-207ENST00000612558 ZNF554Q86TJ5 538 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 RTN4RL2Q86UN3 420 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 OR56B4Q8NH76 319 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 NEURL2Q9BR09 285 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 ADAT1Q9BUB4 502 aaKnown RBP7.59□□□□□ -1.19
CCDC47-207ENST00000612558 RHOFQ9HBH0 211 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 NKIRAS2Q9NYR9 191 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 MTCH1Q9NZJ7 389 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 PLCE1Q9P212 2302 aa7.59□□□□□ -1.19
CCDC47-207ENST00000612558 A0A0B4J293 547 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 H3BUI4 141 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 J3QT63 122 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 TPD52L2O43399 206 aaKnown RBP7.59□□□□□ -1.2
CCDC47-207ENST00000612558 SYNGR1O43759 233 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 RAB3DO95716 219 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 FCER2P06734 321 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 ZNF250P15622 560 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 NAT1P18440 290 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 TBPP20226 339 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 HLA-DMAP28067 261 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 CHATP28329 748 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 CHRNB4P30926 498 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 ASCL1P50553 236 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 RPS23P62266 143 aaKnown RBP7.59□□□□□ -1.2
CCDC47-207ENST00000612558 MEF2DQ14814 521 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 CARTPTQ16568 116 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 PIGYQ3MUY2 71 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 PCSK4Q6UW60 755 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 TMEM108Q6UXF1 575 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 C6orf201Q7Z4U5 140 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 GVQW1Q8N7I0 195 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 SPERTQ8NA61 448 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 OR4S1Q8NGB4 309 aa7.59□□□□□ -1.2
CCDC47-207ENST00000612558 OR4D10Q8NGI6 311 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms