RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 CHRFAM7AQ494W8 412 aa10.46□□□□□ -0.73
TP53-220ENST00000610623 SP5Q6BEB4 398 aaPredicted RBP10.46□□□□□ -0.73
TP53-220ENST00000610623 CBLN3Q6UW01 205 aa10.46□□□□□ -0.73
TP53-220ENST00000610623 GALNTL5Q7Z4T8 443 aa10.46□□□□□ -0.73
TP53-220ENST00000610623 CYB561D1Q8N8Q1 229 aa10.46□□□□□ -0.73
TP53-220ENST00000610623 RBMXL1Q96E39 390 aaKnown RBP10.46□□□□□ -0.73
TP53-220ENST00000610623 C1orf147Q96MC9 270 aaPredicted RBP10.46□□□□□ -0.73
TP53-220ENST00000610623 CCDC3Q9BQI4 270 aa10.46□□□□□ -0.73
TP53-220ENST00000610623 SNHG12Q9BXW3 62 aa10.46□□□□□ -0.73
TP53-220ENST00000610623 HIPK2Q9H2X6 1198 aa10.46□□□□□ -0.73
TP53-220ENST00000610623 CDH20Q9HBT6 801 aa10.46□□□□□ -0.73
TP53-220ENST00000610623 DECR2Q9NUI1 292 aa10.46□□□□□ -0.73
TP53-220ENST00000610623 COA3Q9Y2R0 106 aaPredicted RBP10.46□□□□□ -0.73
TP53-220ENST00000610623 FAM230AA0A1W2PPH8 454 aa10.46□□□□□ -0.74
TP53-220ENST00000610623 HRKO00198 91 aa10.46□□□□□ -0.74
TP53-220ENST00000610623 IGHMP01871 453 aa10.46□□□□□ -0.74
TP53-220ENST00000610623 TTRP02766 147 aa10.46□□□□□ -0.74
TP53-220ENST00000610623 CELA2BP08218 269 aaPredicted RBP10.46□□□□□ -0.74
TP53-220ENST00000610623 H2BFMP0C1H6 154 aa10.46□□□□□ -0.74
TP53-220ENST00000610623 NR2C1P13056 603 aa10.46□□□□□ -0.74
TP53-220ENST00000610623 CEBPGP53567 150 aa10.46□□□□□ -0.74
TP53-220ENST00000610623 TMEM176BQ3YBM2 270 aaPredicted RBP10.46□□□□□ -0.74
TP53-220ENST00000610623 COA6Q5JTJ3 125 aaKnown RBP10.46□□□□□ -0.74
TP53-220ENST00000610623 OR2G3Q8NGZ4 309 aa10.46□□□□□ -0.74
TP53-220ENST00000610623 FAM206AQ9NX38 181 aa10.46□□□□□ -0.74
TP53-220ENST00000610623 LIPGQ9Y5X9 500 aa10.46□□□□□ -0.74
TP53-220ENST00000610623 CEP290O15078 2479 aa10.46□□□□□ -0.74
TP53-220ENST00000610623 LOC101059948A0A1B0GTJ6 334 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 MED19A0JLT2 244 aaPredicted RBP10.45□□□□□ -0.74
TP53-220ENST00000610623 SCDO00767 359 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 TK1P04183 234 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 ZNF25P17030 456 aaPredicted RBP10.45□□□□□ -0.74
TP53-220ENST00000610623 GPR3P46089 330 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 SLC6A8P48029 635 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 ZNF542PQ5EBM4 170 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 SLC16A14Q7RTX9 510 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 FAM89BQ8N5H3 189 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 NAXEQ8NCW5 288 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 SLC26A10Q8NG04 563 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 OR5L2Q8NGL0 311 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 C16orf52Q8NHV5 167 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 PCED1AQ9H1Q7 454 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 TMEM131Q92545 1883 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 IGHV1OR15-9A0A0B4J2B8 117 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 ZNF705GA8MUZ8 300 aaPredicted RBP10.45□□□□□ -0.74
TP53-220ENST00000610623 RRP8O43159 456 aaKnown RBP10.45□□□□□ -0.74
TP53-220ENST00000610623 ST8SIA3O43173 380 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 MPZL1O95297 269 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 CYB5R3P00387 301 aaPredicted RBP10.45□□□□□ -0.74
TP53-220ENST00000610623 OPN1MWP04001 364 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 OPN1MW2P0DN77 364 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 OPN1MW3P0DN78 364 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 PNLIPP16233 465 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 BCKDHBP21953 392 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 ACY1Q03154 408 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 ARL6IP1Q15041 203 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 TAF9Q16594 264 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 DNM1P34Q6PK57 102 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 OR1P1Q8NH06 330 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 RNF133Q8WVZ7 376 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 SLC25A36Q96CQ1 311 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 LRRC61Q9BV99 259 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 OR10A2Q9H208 303 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 BANF2Q9H503 90 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 AK3Q9UIJ7 227 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 VAX2Q9UIW0 290 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 GOLT1BQ9Y3E0 138 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 MMACHCQ9Y4U1 282 aa10.45□□□□□ -0.74
TP53-220ENST00000610623 REV3LO60673 3130 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 BLACEA4D250 179 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 M0QZK8 103 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 DLEU1O43261 78 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 HSPA12AO43301 675 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 GGCTO75223 188 aaKnown RBP10.44□□□□□ -0.74
TP53-220ENST00000610623 HBE1P02100 147 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 LINC00614P0C842 121 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 ZNF20P17024 532 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 DUSP1P28562 367 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 APLNRP35414 380 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 NOVA1P51513 510 aaKnown RBP10.44□□□□□ -0.74
TP53-220ENST00000610623 ERVFC1-1P60608 527 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 PPA1Q15181 289 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 RAB35Q15286 201 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 DCAF10Q5QP82 559 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.44□□□□□ -0.74
TP53-220ENST00000610623 RTL6Q6ICC9 239 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 KLHL24Q6TFL4 600 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 SLC25A26Q70HW3 274 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 MRPL52Q86TS9 123 aaKnown RBP10.44□□□□□ -0.74
TP53-220ENST00000610623 LRTM2Q8N967 370 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 OR14L1PQ8NHC6 308 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 ZNF524Q96C55 264 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 PBOV1Q9GZY1 135 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 OR10A5Q9H207 317 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 UBE2ZQ9H832 354 aaPredicted RBP10.44□□□□□ -0.74
TP53-220ENST00000610623 GPR84Q9NQS5 396 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 PADI1Q9ULC6 663 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 MRPS17Q9Y2R5 130 aaKnown RBP10.44□□□□□ -0.74
TP53-220ENST00000610623 V9GYS6 101 aa10.44□□□□□ -0.74
TP53-220ENST00000610623 A0A1B0GU03 582 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms