RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 COL13A1Q5TAT6 717 aaPredicted RBP12.6□□□□□ -0.39
PCDHB16-201ENST00000609684 SOX7Q9BT81 388 aa12.6□□□□□ -0.39
PCDHB16-201ENST00000609684 LSM2Q9Y333 95 aaKnown RBP12.6□□□□□ -0.39
PCDHB16-201ENST00000609684 YIF1AO95070 293 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 ADH4P08319 380 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 OR5AC1P0C628 307 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 RRASP10301 218 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 LIMS1P48059 325 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 NANOS3P60323 173 aaKnown RBP12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 C3AR1Q16581 482 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 PDZD11Q5EBL8 140 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 RFLNBQ8N5W9 214 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 TVP23CQ96ET8 276 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 RASL12Q9NYN1 266 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 C3orf85A0A1B0GTC6 90 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 K7EQM0 130 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 HNF1AP20823 631 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 RAB13P51153 203 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 DEFA6Q01524 100 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 TUSC5Q8IXB3 177 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 OR5M8Q8NGP6 311 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 WDR13Q9H1Z4 485 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 KLHDC2Q9Y2U9 406 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 LANCL1O43813 399 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 TNFRSF1AP19438 455 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 BMP5P22003 454 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 MAGEA5P43359 124 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 PPP1CBP62140 327 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 SMIM15Q7Z3B0 74 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 AKR1E2Q96JD6 320 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 MAP6Q96JE9 813 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 CACNA1IQ9P0X4 2223 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 DEFB108AA8MXU0 73 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 HPXP02790 462 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 PGA3P0DJD8 388 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 CPN1P15169 458 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 MIDNQ504T8 468 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 GPR87Q9BY21 358 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 KIAA1456Q9P272 454 aa12.59□□□□□ -0.39
PCDHB16-201ENST00000609684 ARID2Q68CP9 1835 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 EPOPA6NHQ4 379 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 RNASEK-C17orf49H0YIS7 233 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 SLC25A4P12235 298 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 MMP16P51512 607 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 MICBQ29980 383 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 ABHD3Q8WU67 409 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 RGPD3A6NKT7 1758 aaPredicted RBP12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 OR5B21A6NL26 309 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 TMIGD3P0DMS9 266 aaPredicted RBP12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 AKR1C3P42330 323 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 SSTP61278 116 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 UBAC2Q8NBM4 344 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 GNB4Q9HAV0 340 aa12.58□□□□□ -0.4
PCDHB16-201ENST00000609684 SOX8P57073 446 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 KLF9Q13886 244 aaPredicted RBP12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 ENDOGQ14249 297 aaKnown RBP12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 PRSS54Q6PEW0 395 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 CABLES2Q9BTV7 478 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 WDR54Q9H977 334 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 ANXA10Q9UJ72 324 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 ASAH2BP0C7U1 165 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 LIFP15018 202 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 SIGLEC14Q08ET2 396 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 TMEM267Q0VDI3 215 aaPredicted RBP12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 TIGITQ495A1 244 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 ZNF331Q9NQX6 463 aaPredicted RBP12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 PRR13Q9NZ81 148 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 PSG11Q9UQ72 335 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 HMSDA8MTL9 139 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 TRAF3IP2O43734 574 aaPredicted RBP12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 CST2P09228 141 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 EFNB2P52799 333 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 ZNF90Q03938 601 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 GGTLC2Q14390 218 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 M0R296 226 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 HEXAP06865 529 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 SFTA3P0C7M3 94 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 ZP3P21754 424 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 UBE2G2P60604 165 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 RPS4XP62701 263 aaKnown RBP12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 CLPPQ16740 277 aaPredicted RBP12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 NUFIP2Q7Z417 695 aaKnown RBP12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 OR5C1Q8NGR4 320 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 OR13D1Q8NGV5 346 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 LRRC29Q8WV35 223 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 MPC1Q9Y5U8 109 aa12.57□□□□□ -0.4
PCDHB16-201ENST00000609684 VSIG8P0DPA2 414 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 LPAR6P43657 344 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 GUK1Q16774 197 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 CLEC12BQ2HXU8 276 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 BPIFCQ8NFQ6 507 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 FBLIM1Q8WUP2 373 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 NTNG2Q96CW9 530 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 NIT2Q9NQR4 276 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 APC2O95996 2303 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 MYOFQ9NZM1 2061 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 TRIOBPQ9H2D6 2365 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 FAM24AA6NFZ4 105 aa12.56□□□□□ -0.4
PCDHB16-201ENST00000609684 FAHD2BQ6P2I3 314 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms