RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 DGUOKQ16854 277 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 Q499Y3 187 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 SPIN3Q5JUX0 258 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 C9orf139Q6ZV77 190 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 CMTM4Q8IZR5 234 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 TMEM158Q8WZ71 300 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 RGP1Q92546 391 aaPredicted RBP11.81□□□□□ -0.52
HDDC2-209ENST00000609477 ZNF488Q96MN9 340 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 WDFY2Q96P53 400 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 SUCNR1Q9BXA5 334 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 GLS2Q9UI32 602 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 BLOC1S6Q9UL45 172 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 SIRT4Q9Y6E7 314 aaPredicted RBP11.81□□□□□ -0.52
HDDC2-209ENST00000609477 TRBV5-5A0A0J9YX44 114 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 A0A1W2PPH5 198 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 GPX5O75715 221 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 TOX4O94842 621 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 PLATP00750 562 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 HCKP08631 526 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 MMP9P14780 707 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 BMXP51813 675 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 FGF12P61328 243 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 GPR50Q13585 617 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 ZNF146Q15072 292 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 TUSC1Q2TAM9 212 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 KLF17Q5JT82 389 aaPredicted RBP11.8□□□□□ -0.52
HDDC2-209ENST00000609477 RBM48Q5RL73 367 aaKnown RBP11.8□□□□□ -0.52
HDDC2-209ENST00000609477 FAM58AQ8N1B3 248 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 BPIFB2Q8N4F0 458 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 MS4A15Q8N5U1 240 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 CD177Q8N6Q3 437 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 ZNRF1Q8ND25 227 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 OR5D13Q8NGL4 314 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 ZFAND2BQ8WV99 257 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 SLAMF9Q96A28 289 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 PGLYRP3Q96LB9 341 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 Q9H521 79 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 OCEL1Q9H607 264 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 TMEM138Q9NPI0 162 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 CKLFQ9UBR5 152 aa11.8□□□□□ -0.52
HDDC2-209ENST00000609477 A0A1B0GW55 424 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 K7N7A8 449 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 M0R1W7 72 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 KDM4BO94953 1096 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 DUX4L2P0CJ85 424 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 DUX4L3P0CJ86 424 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 DUX4L4P0CJ87 422 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 DUX4L5P0CJ88 424 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 DUX4L6P0CJ89 424 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 DUX4L7P0CJ90 424 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 NDUFB7P17568 137 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 CELP19835 753 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 CRHBPP24387 322 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 MAPK3P27361 379 aaPredicted RBP11.79□□□□□ -0.52
HDDC2-209ENST00000609477 POU3F4P49335 361 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 PPP3R1P63098 170 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 SPHARQ15513 63 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 GPR157Q5UAW9 335 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 DUX4L9Q6RFH8 374 aaPredicted RBP11.79□□□□□ -0.52
HDDC2-209ENST00000609477 METAP1DQ6UB28 335 aaPredicted RBP11.79□□□□□ -0.52
HDDC2-209ENST00000609477 TMEM185AQ8NFB2 350 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 PXT1Q8NFP0 134 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 EMG1Q92979 244 aaKnown RBP11.79□□□□□ -0.52
HDDC2-209ENST00000609477 ZNF184Q99676 751 aaPredicted RBP11.79□□□□□ -0.52
HDDC2-209ENST00000609477 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 DUX4Q9UBX2 424 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 ATRQ13535 2644 aa11.79□□□□□ -0.52
HDDC2-209ENST00000609477 FBN1P35555 2871 aaKnown RBP11.78□□□□□ -0.52
HDDC2-209ENST00000609477 RGS10O43665 173 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 TK1P04183 234 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 SOX2P48431 317 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 HILS1P60008 231 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 ZP1P60852 638 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 RPS11P62280 158 aaKnown RBP eCLIP11.78□□□□□ -0.52
HDDC2-209ENST00000609477 ARF6P62330 175 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 BLMHQ13867 455 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 IRF3Q14653 427 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 RBMS3Q6XE24 437 aaKnown RBP11.78□□□□□ -0.52
HDDC2-209ENST00000609477 PRSS48Q7RTY5 328 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 CDH26Q8IXH8 852 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 H1FXQ92522 213 aaKnown RBP11.78□□□□□ -0.52
HDDC2-209ENST00000609477 PCGF1Q9BSM1 259 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 MS4A7Q9GZW8 240 aaPredicted RBP11.78□□□□□ -0.52
HDDC2-209ENST00000609477 UNKLQ9H9P5 680 aaKnown RBP11.78□□□□□ -0.52
HDDC2-209ENST00000609477 HMG20AQ9NP66 347 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 ISYNA1Q9NPH2 558 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 OR14J1Q9UGF5 321 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 FOXJ3Q9UPW0 622 aa11.78□□□□□ -0.52
HDDC2-209ENST00000609477 hCG_1809904A0A1W2PP81 198 aa11.77□□□□□ -0.53
HDDC2-209ENST00000609477 A0A1W2PPE2 198 aa11.77□□□□□ -0.53
HDDC2-209ENST00000609477 A0A1W2PR64 198 aa11.77□□□□□ -0.53
HDDC2-209ENST00000609477 A0A1W2PRV1 198 aa11.77□□□□□ -0.53
HDDC2-209ENST00000609477 F8VVB4 439 aa11.77□□□□□ -0.53
HDDC2-209ENST00000609477 F8VWA3 439 aa11.77□□□□□ -0.53
HDDC2-209ENST00000609477 SH2D1BO14796 132 aa11.77□□□□□ -0.53
HDDC2-209ENST00000609477 DENRO43583 198 aaKnown RBP11.77□□□□□ -0.53
HDDC2-209ENST00000609477 SPRY1O43609 319 aaPredicted RBP11.77□□□□□ -0.53
HDDC2-209ENST00000609477 MRPS14O60783 128 aaKnown RBP11.77□□□□□ -0.53
HDDC2-209ENST00000609477 TMEM225BP0DP42 221 aa11.77□□□□□ -0.53
HDDC2-209ENST00000609477 SELLP14151 372 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms