RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 EWSR1Q01844 656 aaKnown RBP eCLIP13.52□□□□□ -0.242e-7■■■■□ 22.1
RER1-209ENST00000605895 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.52□□□□□ -0.24
RER1-209ENST00000605895 LCN15Q6UWW0 184 aa13.52□□□□□ -0.24
RER1-209ENST00000605895 LANCL3Q6ZV70 420 aa13.52□□□□□ -0.24
RER1-209ENST00000605895 PTPMT1Q8WUK0 201 aaPredicted RBP13.52□□□□□ -0.24
RER1-209ENST00000605895 CERS4Q9HA82 394 aa13.52□□□□□ -0.24
RER1-209ENST00000605895 SIRT7Q9NRC8 400 aa13.52□□□□□ -0.24
RER1-209ENST00000605895 MAFFQ9ULX9 164 aa13.52□□□□□ -0.24
RER1-209ENST00000605895 C9J4A7 227 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 MS4A18H0YCH9 400 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 BCAT2O15382 392 aaPredicted RBP13.52□□□□□ -0.25
RER1-209ENST00000605895 CLPSP04118 112 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 MMP16P51512 607 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 TAS2R46P59540 309 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 TLE3Q04726 772 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 FUT7Q11130 342 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 ICAM4Q14773 271 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 P2RY6Q15077 328 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 MS4A18Q3C1V0 323 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 OR2AJ1Q8NGZ0 328 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 TMEM171Q8WVE6 324 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 RNF133Q8WVZ7 376 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 TMEM37Q8WXS4 190 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 BMFQ96LC9 184 aa13.52□□□□□ -0.25
RER1-209ENST00000605895 IGHV3-20A0A0C4DH32 117 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 FOLR1P15328 257 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 CSNK1A1P48729 337 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 ERVS71-1P61550 626 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 NUTF2P61970 127 aaKnown RBP13.51□□□□□ -0.25
RER1-209ENST00000605895 RNF4P78317 190 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 KISS1Q15726 138 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 PLPP5Q8NEB5 264 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 OR5C1Q8NGR4 320 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 C2orf88Q9BSF0 95 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 GPR87Q9BY21 358 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 WWTR1Q9GZV5 400 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 SOHLH2Q9NX45 425 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 HMGB3O15347 200 aaKnown RBP13.51□□□□□ -0.25
RER1-209ENST00000605895 SPRY1O43609 319 aaPredicted RBP13.51□□□□□ -0.25
RER1-209ENST00000605895 IL33O95760 270 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 AMBPP02760 352 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 ZNF17P17021 662 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 CLDN17P56750 224 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 TNFRSF9Q07011 255 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 PLCXD2Q0VAA5 305 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 COMMD1Q8N668 190 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 CABLES2Q9BTV7 478 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 FAM186AA6NE01 2351 aa13.51□□□□□ -0.25
RER1-209ENST00000605895 IGSF23A1L1A6 192 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 ST8SIA3O43173 380 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 DXOO77932 396 aaKnown RBP13.5□□□□□ -0.25
RER1-209ENST00000605895 CD200P41217 278 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 GLIPR1P48060 266 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 HLA-DQA1Q5Y7H0 255 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 SNHG12Q9BXW3 62 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 TUBD1Q9UJT1 453 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 NCOA6Q14686 2063 aaPredicted RBP13.5□□□□□ -0.25
RER1-209ENST00000605895 NKX2-6A6NCS4 301 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 MBP02144 154 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 ZNF728P0DKX0 622 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 MLF1P58340 268 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 CXorf66Q5JRM2 361 aaPredicted RBP13.5□□□□□ -0.25
RER1-209ENST00000605895 DBX2Q6ZNG2 339 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 MYPOPQ86VE0 399 aaPredicted RBP13.5□□□□□ -0.25
RER1-209ENST00000605895 PLA2G2FQ9BZM2 168 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 RNF208Q9H0X6 261 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 CEP290O15078 2479 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 DOCK11Q5JSL3 2073 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 CABIN1Q9Y6J0 2220 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 CRYM-AS1A6NIL9 109 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 GNMTQ14749 295 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 ZNF776Q68DI1 518 aaPredicted RBP13.5□□□□□ -0.25
RER1-209ENST00000605895 NUP54Q7Z3B4 507 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 WNT16Q9UBV4 365 aa13.5□□□□□ -0.25
RER1-209ENST00000605895 IL18BPO95998 194 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 UCP2P55851 309 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 HLA-DRB3P79483 266 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 COL10A1Q03692 680 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 ZNF154Q13106 437 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 RUNX3Q13761 415 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 NCR3LG1Q68D85 454 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 SLC25A24Q6NUK1 477 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 C1orf87Q8N0U7 546 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 CALHM2Q9HA72 323 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 STRAPQ9Y3F4 350 aaKnown RBP13.49□□□□□ -0.25
RER1-209ENST00000605895 A0A1B0GUS0 222 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 SHISA7A6NL88 538 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 MSTNO14793 375 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
RER1-209ENST00000605895 RPL29P47914 159 aaKnown RBP13.49□□□□□ -0.25
RER1-209ENST00000605895 PCP4P48539 62 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 HSF1Q00613 529 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 PPA1Q15181 289 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 SLC35G3Q8N808 338 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 OR4X1Q8NH49 305 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 LRFN1Q9P244 771 aa13.49□□□□□ -0.25
RER1-209ENST00000605895 XKRY2A2RUG3 117 aa13.48□□□□□ -0.25
RER1-209ENST00000605895 CEACAM18A8MTB9 384 aa13.48□□□□□ -0.25
RER1-209ENST00000605895 ZNHIT1O43257 154 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms