RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 SAP30LQ9HAJ7 183 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 MSL2Q9HCI7 577 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 GPR173Q9NS66 373 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 ITGB1BP2Q9UKP3 347 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 DYSFO75923 2080 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 PRRC2AP48634 2157 aaKnown RBP8.55□□□□□ -1.04
UPF1-213ENST00000601981 TRAV18A0A075B6X5 111 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 ZSCAN5BA6NJL1 495 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 CENPXA8MT69 81 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 SULT1C2O00338 296 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 PFDN1O60925 122 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 KDM4BO94953 1096 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 NRASP01111 189 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 IGHV1-46P01743 117 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 IGHV4-39P01824 125 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 CD55P08174 381 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 GSTT2BP0CG30 244 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 PTGFRP43088 359 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 OR3A4PP47883 348 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 CCL8P80075 99 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 TNFAIP6P98066 277 aaPredicted RBP8.55□□□□□ -1.04
UPF1-213ENST00000601981 SSBP1Q04837 148 aaKnown RBP8.55□□□□□ -1.04
UPF1-213ENST00000601981 UNC119Q13432 240 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 KLF9Q13886 244 aaPredicted RBP8.55□□□□□ -1.04
UPF1-213ENST00000601981 Q5PR19 223 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 CRIP3Q6Q6R5 217 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 TOMM5Q8N4H5 51 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 DUSP18Q8NEJ0 188 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 OR8S1Q8NH09 359 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 KCNG3Q8TAE7 436 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 DEDD2Q8WXF8 326 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 PPP1R14BQ96C90 147 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 SPACA5Q96QH8 159 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 HIST1H2AAQ96QV6 131 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 ADAT1Q9BUB4 502 aaKnown RBP8.55□□□□□ -1.04
UPF1-213ENST00000601981 CST11Q9H112 138 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 SCPEP1Q9HB40 452 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 DLL4Q9NR61 685 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 IL19Q9UHD0 177 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 SLC7A11Q9UPY5 501 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 MPC1Q9Y5U8 109 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 CACNG2Q9Y698 323 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 CSMD2Q7Z408 3487 aa8.55□□□□□ -1.04
UPF1-213ENST00000601981 FAM240BA0A1B0GVZ2 78 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 ANKRD20A5PA0PJZ0 165 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 NAP1L6A6NFF2 107 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 IFNL4K9M1U5 179 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 NDUFS8O00217 210 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 ORC5O43913 435 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 CST4P01036 141 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 CHRM2P08172 466 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 DAOP14920 347 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 CA6P23280 308 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 PRSS3P35030 304 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 RBP2P50120 134 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 PDLIM4P50479 330 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 FUT6P51993 359 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 ZP1P60852 638 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 MRPS11P82912 194 aaKnown RBP8.54□□□□□ -1.04
UPF1-213ENST00000601981 GPR176Q14439 515 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 CARTPTQ16568 116 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 HFEQ30201 348 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 RNASE12Q5GAN4 147 aaKnown RBP8.54□□□□□ -1.04
UPF1-213ENST00000601981 OR10K2Q6IF99 312 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 RNF144BQ7Z419 303 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 ZCCHC24Q8N2G6 241 aaKnown RBP8.54□□□□□ -1.04
UPF1-213ENST00000601981 CELF2-AS1Q8N7Q2 184 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 NPRL2Q8WTW4 380 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 TNFAIP8L1Q8WVP5 186 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 RDH5Q92781 318 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 GCDHQ92947 438 aaPredicted RBP8.54□□□□□ -1.04
UPF1-213ENST00000601981 BORCS8Q96FH0 119 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 NEDD4LQ96PU5 975 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 MICU1Q9BPX6 476 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 PIMREGQ9BSJ6 248 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 TMEM59Q9BXS4 323 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 LPAR5Q9H1C0 372 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 CXXC4Q9H2H0 198 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 MTFP1Q9UDX5 166 aa8.54□□□□□ -1.04
UPF1-213ENST00000601981 IGHV1-69-2A0A0G2JMI3 117 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 RAB27BO00194 218 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 CDC14BO60729 498 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 LPLP06858 475 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 SLC6A1P30531 599 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 BTCP35070 178 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 ATP1B3P54709 279 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 MTCP1P56278 107 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 PRSS12P56730 875 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 RPS27AP62979 156 aaKnown RBP8.53□□□□□ -1.04
UPF1-213ENST00000601981 CLEC12BQ2HXU8 276 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 PLA1AQ53H76 456 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 TMEM255AQ5JRV8 349 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 PLCXD3Q63HM9 321 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 OLFML2AQ68BL7 652 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 PLET1Q6UQ28 207 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 ASCL4Q6XD76 172 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 Q6ZR03 302 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 PEG10Q86TG7 708 aaKnown RBP8.53□□□□□ -1.04
UPF1-213ENST00000601981 ZDHHC23Q8IYP9 409 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 CADM3Q8N126 398 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms