RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GPX8Q8TED1 209 aa15.28■□□□□ 0.04
VRK3-225ENST00000601912 SEH1LQ96EE3 360 aa15.28■□□□□ 0.04
VRK3-225ENST00000601912 NEDD4LQ96PU5 975 aa15.28■□□□□ 0.04
VRK3-225ENST00000601912 TLNRD1Q9H1K6 362 aa15.28■□□□□ 0.04
VRK3-225ENST00000601912 ZFYVE26Q68DK2 2539 aa15.27■□□□□ 0.04
VRK3-225ENST00000601912 ANKHD1Q8IWZ3 2542 aaKnown RBP15.27■□□□□ 0.04
VRK3-225ENST00000601912 RELNP78509 3460 aa15.27■□□□□ 0.04
VRK3-225ENST00000601912 IGHV3-64DA0A0J9YX35 117 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 FOXI3A8MTJ6 420 aaPredicted RBP15.27■□□□□ 0.03
VRK3-225ENST00000601912 SERPINE3A8MV23 424 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 E7EQL1 145 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 H3BUI4 141 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 GEMIN2O14893 280 aaKnown RBP15.27■□□□□ 0.03
VRK3-225ENST00000601912 LYRM1O43325 122 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 SPRY3O43610 288 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 C1QL1O75973 258 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 ACAA1P09110 424 aaPredicted RBP15.27■□□□□ 0.03
VRK3-225ENST00000601912 SRP9P49458 86 aaKnown RBP15.27■□□□□ 0.03
VRK3-225ENST00000601912 GNG2P59768 71 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 ACTBP60709 375 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 ACTG1P63261 375 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 GUCA2AQ02747 115 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 DCDC5Q6ZRR9 648 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 ADGRG4Q8IZF6 3080 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 FAM58AQ8N1B3 248 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 BATF2Q8N1L9 274 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 CELF2-AS1Q8N7Q2 184 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 GTF3AQ92664 365 aaKnown RBP15.27■□□□□ 0.03
VRK3-225ENST00000601912 EMG1Q92979 244 aaKnown RBP15.27■□□□□ 0.03
VRK3-225ENST00000601912 C11orf54Q9H0W9 315 aaPredicted RBP15.27■□□□□ 0.03
VRK3-225ENST00000601912 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.27■□□□□ 0.03
VRK3-225ENST00000601912 HSF4Q9ULV5 492 aa15.27■□□□□ 0.03
VRK3-225ENST00000601912 F8VVB4 439 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 F8VWA3 439 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 MFNGO00587 321 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 PRKACAP17612 351 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 APOBEC3AP31941 199 aaPredicted RBP15.26■□□□□ 0.03
VRK3-225ENST00000601912 DYRK1AQ13627 763 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 NKAPLQ5M9Q1 402 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 LINC00596Q86U02 117 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 PIK3IP1Q96FE7 263 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 ZNF488Q96MN9 340 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 DIRC2Q96SL1 478 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 PECRQ9BY49 303 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 CACNG2Q9Y698 323 aa15.26■□□□□ 0.03
VRK3-225ENST00000601912 SMG1Q96Q15 3661 aaKnown RBP15.26■□□□□ 0.03
VRK3-225ENST00000601912 SPTBN1Q01082 2364 aaKnown RBP15.25■□□□□ 0.03
VRK3-225ENST00000601912 DEFB108AA8MXU0 73 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 NOS1APO75052 506 aaPredicted RBP15.25■□□□□ 0.03
VRK3-225ENST00000601912 OR7C1O76099 320 aaPredicted RBP15.25■□□□□ 0.03
VRK3-225ENST00000601912 PTBP3O95758 552 aaKnown RBP15.25■□□□□ 0.03
VRK3-225ENST00000601912 CSF1P09603 554 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 PGA5P0DJD9 388 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 ARFRP1Q13795 201 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 KLF9Q13886 244 aaPredicted RBP15.25■□□□□ 0.03
VRK3-225ENST00000601912 MPV17LQ2QL34 196 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 PCGF3Q3KNV8 242 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 PRAMEF6Q5VXH4 476 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 OR2V2Q96R30 315 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 NRIP2Q9BQI9 281 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 C7orf50Q9BRJ6 194 aaKnown RBP15.25■□□□□ 0.03
VRK3-225ENST00000601912 UFSP2Q9NUQ7 469 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 CISD1Q9NZ45 108 aaKnown RBP15.25■□□□□ 0.03
VRK3-225ENST00000601912 ELF5Q9UKW6 265 aaPredicted RBP15.25■□□□□ 0.03
VRK3-225ENST00000601912 KCNK7Q9Y2U2 307 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 ANKRD20A5PA0PJZ0 165 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 MEIS3P1A6NDR6 274 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 M0R233 179 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 SIAH2O43255 324 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 TPD52L2O43399 206 aaKnown RBP15.25■□□□□ 0.03
VRK3-225ENST00000601912 NXPH2O95156 264 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 FUT3P21217 361 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 SNU13P55769 128 aaKnown RBP15.25■□□□□ 0.03
VRK3-225ENST00000601912 MPPED2Q15777 294 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 SIGIRRQ6IA17 410 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 FIP1L1Q6UN15 594 aaKnown RBP15.25■□□□□ 0.03
VRK3-225ENST00000601912 GDPD3Q7L5L3 318 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 C6orf201Q7Z4U5 140 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 TRAPPC6BQ86SZ2 158 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 C11orf53Q8IXP5 236 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 POC1AQ8NBT0 407 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 NUDCD2Q8WVJ2 157 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 DEDD2Q8WXF8 326 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 MEGF10Q96KG7 1140 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 OCEL1Q9H607 264 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 IL19Q9UHD0 177 aa15.25■□□□□ 0.03
VRK3-225ENST00000601912 hCG_1807616A0A1W2PRN6 198 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 PDCD6O75340 191 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 CA11O75493 328 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 IGHV1-46P01743 117 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 CHATP28329 748 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 ERVK11-1P61568 191 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 TNFAIP6P98066 277 aaPredicted RBP15.24■□□□□ 0.03
VRK3-225ENST00000601912 IL13RA2Q14627 380 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 WDR82Q6UXN9 313 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 NRARPQ7Z6K4 114 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 ENKURQ8TC29 256 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 FAM222BQ8WU58 562 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 ST8SIA4Q92187 359 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 NEUROG1Q92886 237 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms