RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 MMP23AO75900 390 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 OR2F2O95006 317 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 ATP6V1B2P21281 511 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 SLC2A5P22732 501 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 BRS3P32247 399 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 MFGE8Q08431 387 aaPredicted RBP13.32□□□□□ -0.28
USE1-208ENST00000600970 IL24Q13007 206 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 SLC35D3Q5M8T2 416 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 OR2T5Q6IEZ7 315 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 CPOQ8IVL8 374 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 OSR2Q8N2R0 312 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 OR10G2Q8NGC3 310 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 OR2T29Q8NH02 315 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 MROQ9BYG7 248 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 PKIBQ9C010 78 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 DPM3Q9P2X0 92 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 DNAJB9Q9UBS3 223 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 A6NIN4 97 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 H0YHG0 523 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 LMO1P25800 156 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 RPS7P62081 194 aaKnown RBP13.31□□□□□ -0.28
USE1-208ENST00000600970 ESRRGP62508 458 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 DGCR2P98153 550 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 GINS1Q14691 196 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 C9orf152Q5JTZ5 239 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 NKAPLQ5M9Q1 402 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 UNQ9370/PRO34162Q6UXP9 181 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 BAIAP2L2Q6UXY1 529 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 C18orf65Q6ZTR6 163 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 ZNF679Q8IYX0 411 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 TFAP2CQ92754 450 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 FEVQ99581 238 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 YIPF3Q9GZM5 350 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 ARGLU1Q9NWB6 273 aaPredicted RBP13.31□□□□□ -0.28
USE1-208ENST00000600970 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.31□□□□□ -0.28
USE1-208ENST00000600970 HHLA2Q9UM44 414 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 V9GYS6 101 aa13.31□□□□□ -0.28
USE1-208ENST00000600970 TCRBV5S2A0A599 114 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 PSMB11A5LHX3 300 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 ZNF254O75437 659 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 SRSF10O75494 262 aaKnown RBP13.3□□□□□ -0.28
USE1-208ENST00000600970 RIDAP52758 137 aaKnown RBP13.3□□□□□ -0.28
USE1-208ENST00000600970 RPL23AP62750 156 aaKnown RBP13.3□□□□□ -0.28
USE1-208ENST00000600970 ROM1Q03395 351 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 ZNF829Q3KNS6 432 aaPredicted RBP13.3□□□□□ -0.28
USE1-208ENST00000600970 C8orf86Q6ZUL3 223 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 ZNF329Q86UD4 541 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 ABHD12Q8N2K0 398 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 OR52N4Q8NGI2 321 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 OR14K1Q8NGZ2 314 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 TRMT10AQ8TBZ6 339 aaKnown RBP13.3□□□□□ -0.28
USE1-208ENST00000600970 CEP19Q96LK0 163 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 ELAC2Q9BQ52 826 aaKnown RBP13.3□□□□□ -0.28
USE1-208ENST00000600970 TTTY10Q9BZA0 68 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 CHST6Q9GZX3 395 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 MAGIXQ9H6Y5 334 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 MTCH1Q9NZJ7 389 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 ACTR3BQ9P1U1 418 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 ZMAT5Q9UDW3 170 aaKnown RBP13.3□□□□□ -0.28
USE1-208ENST00000600970 COPS3Q9UNS2 423 aa13.3□□□□□ -0.28
USE1-208ENST00000600970 LSM4Q9Y4Z0 139 aaKnown RBP13.3□□□□□ -0.28
USE1-208ENST00000600970 SACSQ9NZJ4 4579 aa13.29□□□□□ -0.28
USE1-208ENST00000600970 EPPK1P58107 5090 aaKnown RBP13.29□□□□□ -0.28
USE1-208ENST00000600970 DYNC2H1Q8NCM8 4307 aaKnown RBP13.29□□□□□ -0.28
USE1-208ENST00000600970 A0A1B0GTI1 187 aa13.29□□□□□ -0.28
USE1-208ENST00000600970 IGHA1P01876 353 aa13.29□□□□□ -0.28
USE1-208ENST00000600970 MRPL3P09001 348 aaKnown RBP13.29□□□□□ -0.28
USE1-208ENST00000600970 MYCNOSP40205 109 aa13.29□□□□□ -0.28
USE1-208ENST00000600970 BDH1Q02338 343 aa13.29□□□□□ -0.28
USE1-208ENST00000600970 APOFQ13790 326 aa13.29□□□□□ -0.28
USE1-208ENST00000600970 GRK1Q15835 563 aa13.29□□□□□ -0.28
USE1-208ENST00000600970 Q6ZSR3 168 aa13.29□□□□□ -0.28
USE1-208ENST00000600970 OR2W3Q7Z3T1 314 aa13.29□□□□□ -0.28
USE1-208ENST00000600970 GIPC3Q8TF64 312 aa13.29□□□□□ -0.28
USE1-208ENST00000600970 P2RX4Q99571 388 aa13.29□□□□□ -0.28
USE1-208ENST00000600970 PAPOLBQ9NRJ5 636 aaKnown RBP13.29□□□□□ -0.28
USE1-208ENST00000600970 FAM230AA0A1W2PPH8 454 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 LEUTXA8MZ59 168 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 LOC110117498-PIK3R3F6TDL0 507 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 RAMP3O60896 148 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 INMTO95050 263 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 IGLV1-47P01700 117 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 HMGN1P05114 100 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 PEX2P28328 305 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 ARHGDIBP52566 201 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 CDK5Q00535 292 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 SPATS1Q496A3 300 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 RTN4RL2Q86UN3 420 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 DEFB107AQ8IZN7 70 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 ZNF596Q8TC21 504 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 SLAMF9Q96A28 289 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 CADM1Q9BY67 442 aaKnown RBP13.28□□□□□ -0.28
USE1-208ENST00000600970 IKZF2Q9UKS7 526 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 GTF2A1LQ9UNN4 478 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 UBE2J1Q9Y385 318 aaPredicted RBP13.28□□□□□ -0.28
USE1-208ENST00000600970 PCDHGB5Q9Y5G0 923 aa13.28□□□□□ -0.28
USE1-208ENST00000600970 IGKV1-27A0A075B6S5 117 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 M0QZK8 103 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 PSPNO60542 156 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 ZFPL1O95159 310 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms