RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	RHOF	Q9HBH0	211 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	IL36G	Q9NZH8	169 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	MTCH1	Q9NZJ7	389 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	ABRACL	Q9P1F3	81 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	WIPI2	Q9Y4P8	454 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	ITPR3	Q14573	2671 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	CELSR1	Q9NYQ6	3014 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	HIVEP1	P15822	2718 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026		H7C1Q1	480 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	NOS1AP	O75052	506 aa	Predicted RBP	18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	KDM4B	O94953	1096 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	HTR3B	O95264	441 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	BCL3	P20749	454 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	BMX	P51813	675 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	SLC22A6	Q4U2R8	563 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	MZT2A	Q6P582	158 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	TIMD4	Q96H15	378 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	REG4	Q9BYZ8	158 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	CST11	Q9H112	138 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	NPTN	Q9Y639	398 aa		18.43	■□□□□ 0.54
LTBP4-227	ENST00000600026	NF1	P21359	2839 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	IGKV1-12	A0A0C4DH73	117 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	AKR7A2	O43488	359 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	NXPH2	O95156	264 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	IGKV1D-12	P01611	117 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	SERPINA2	P20848	420 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	GLRA1	P23415	457 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	SCAND1	P57086	179 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	DYNC1I2	Q13409	638 aa	Known RBP	18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	C2orf76	Q3KRA6	126 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	OR2W3	Q7Z3T1	314 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	CIART	Q8N365	385 aa	Predicted RBP	18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	BOLL	Q8N9W6	283 aa	Known RBP	18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	OR10K1	Q8NGX5	313 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	KCNG3	Q8TAE7	436 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	RAB1C	Q92928	201 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	ZNF488	Q96MN9	340 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	RASL12	Q9NYN1	266 aa		18.42	■□□□□ 0.54
LTBP4-227	ENST00000600026	IGHV4-61	A0A0C4DH41	118 aa		18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	SRRM5	B3KS81	715 aa		18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	CRTAP	O75718	401 aa	Predicted RBP	18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	IGHV2-70	P01814	119 aa		18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	SNRPB	P14678	240 aa	Known RBP	18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	HOXA4	Q00056	320 aa	Predicted RBP	18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	CNPY1	Q3B7I2	92 aa		18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	FIP1L1	Q6UN15	594 aa	Known RBP	18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	PEG10	Q86TG7	708 aa	Known RBP	18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	GCSAM	Q8N6F7	178 aa		18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	EMG1	Q92979	244 aa	Known RBP	18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	NRIP2	Q9BQI9	281 aa		18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026	ETV7	Q9Y603	341 aa		18.41	■□□□□ 0.54
LTBP4-227	ENST00000600026		A0A0B4J203	849 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	WNT9B	O14905	357 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	LHB	P01229	141 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	SFTPB	P07988	381 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	VSIG8	P0DPA2	414 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	EGR1	P18146	543 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	NPBWR2	P48146	333 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	GMFB	P60983	142 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	ERVK11-1	P61568	191 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	BTG1	P62324	171 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	FAM201A	Q5SY85	155 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	ELP2	Q6IA86	826 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	FAM58A	Q8N1B3	248 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	BATF2	Q8N1L9	274 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	MAPK1IP1L	Q8NDC0	245 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	LGALS14	Q8TCE9	139 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	MRPS24	Q96EL2	167 aa	Known RBP	18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	C1orf147	Q96MC9	270 aa	Predicted RBP	18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	NARFL	Q9H6Q4	476 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	OR5V1	Q9UGF6	321 aa		18.4	■□□□□ 0.54
LTBP4-227	ENST00000600026	YLPM1	P49750	1951 aa	Known RBP	18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	TMEM272	A0A1B0GTI8	110 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	ISPD	A4D126	451 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	ZNF205	O95201	554 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	GTF2F2	P13984	249 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	PRKACA	P17612	351 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	USF1	P22415	310 aa	Predicted RBP	18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	CD80	P33681	288 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	LOXL1	Q08397	574 aa	Predicted RBP	18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	ZMYND11	Q15326	602 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	SMIM21	Q3B7S5	101 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	ZNF404	Q494X3	552 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	OSR2	Q8N2R0	312 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	MCFD2	Q8NI22	146 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	COX4I2	Q96KJ9	171 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	TMUB1	Q9BVT8	246 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	SLIRP	Q9GZT3	109 aa	Known RBP	18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	RBFOX1	Q9NWB1	397 aa	Known RBP	18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	COMMD3	Q9UBI1	195 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	DNAJB11	Q9UBS4	358 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	FBLN5	Q9UBX5	448 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	RAB22A	Q9UL26	194 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026	SPATA2	Q9UM82	520 aa		18.39	■□□□□ 0.53
LTBP4-227	ENST00000600026		A0A075B6Q4	140 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	PPIAL4E	A0A075B759	164 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	TMEM14DP	A8MWL7	114 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	PPIAL4D	F5H284	164 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	SMAD7	O15105	426 aa	Known RBP	18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	MPIG6B	O95866	241 aa		18.38	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms