RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 KDM4BO94953 1096 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 MAS1P04201 325 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 PSG2P11465 335 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 AMY2BP19961 511 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 GALP22466 123 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 ZNF93P35789 620 aaPredicted RBP15.14■□□□□ 0.01
LIG1-216ENST00000598938 NPBWR2P48146 333 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 SEC61A1P61619 476 aaKnown RBP15.14■□□□□ 0.01
LIG1-216ENST00000598938 ZNF841Q6ZN19 808 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 LRRTM1Q86UE6 522 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 LYPD6Q86Y78 171 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 BATF2Q8N1L9 274 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 PXT1Q8NFP0 134 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 OR5T2Q8NGG2 359 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 OR8B3Q8NGG8 313 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 OR8B2Q96RD0 313 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 GPER1Q99527 375 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 TCF7L1Q9HCS4 588 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 VCX3AQ9NNX9 186 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 CTSZQ9UBR2 303 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 LPAR3Q9UBY5 353 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 ZNF222Q9UK12 451 aa15.14■□□□□ 0.01
LIG1-216ENST00000598938 IGKV1D-17A0A075B6S4 117 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 TRDV1A0A1B0GX56 115 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 A8MXK9 166 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 ARL6IP5O75915 188 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 SMIM18P0DKX4 95 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 TMEM225BP0DP42 221 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 ZNF16P17020 682 aaPredicted RBP15.13■□□□□ 0.01
LIG1-216ENST00000598938 JUNBP17275 347 aaPredicted RBP15.13■□□□□ 0.01
LIG1-216ENST00000598938 ADRA2CP18825 462 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 SRMP19623 302 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 BCL3P20749 454 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 ASCL4Q6XD76 172 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 ZNF788Q6ZQV5 615 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 NLRC3Q7RTR2 1065 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 NKAIN3Q8N8D7 197 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 TNFAIP8L1Q8WVP5 186 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 CCL13Q99616 98 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 NKX3-1Q99801 234 aaPredicted RBP15.13■□□□□ 0.01
LIG1-216ENST00000598938 RHOFQ9HBH0 211 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 SMURF1Q9HCE7 757 aa15.13■□□□□ 0.01
LIG1-216ENST00000598938 MEGF11A6BM72 1044 aa15.12■□□□□ 0.01
LIG1-216ENST00000598938 KNG1P01042 644 aa15.12■□□□□ 0.01
LIG1-216ENST00000598938 MSMBP08118 114 aa15.12■□□□□ 0.01
LIG1-216ENST00000598938 ZFP36P26651 326 aaKnown RBP15.12■□□□□ 0.01
LIG1-216ENST00000598938 PTGFRP43088 359 aa15.12■□□□□ 0.01
LIG1-216ENST00000598938 OR3A4PP47883 348 aa15.12■□□□□ 0.01
LIG1-216ENST00000598938 PITPNBP48739 271 aa15.12■□□□□ 0.01
LIG1-216ENST00000598938 ESCO2Q56NI9 601 aa15.12■□□□□ 0.01
LIG1-216ENST00000598938 C1QL2Q7Z5L3 287 aa15.12■□□□□ 0.01
LIG1-216ENST00000598938 EMG1Q92979 244 aaKnown RBP15.12■□□□□ 0.01
LIG1-216ENST00000598938 GAFA1Q96PS6 74 aa15.12■□□□□ 0.01
LIG1-216ENST00000598938 SSBP3Q9BWW4 388 aaPredicted RBP15.12■□□□□ 0.01
LIG1-216ENST00000598938 RBFOX1Q9NWB1 397 aaKnown RBP15.12■□□□□ 0.01
LIG1-216ENST00000598938 POLR3KQ9Y2Y1 108 aaPredicted RBP15.12■□□□□ 0.01
LIG1-216ENST00000598938 A0A1B0GW55 424 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 NKX6-3A6NJ46 265 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 TMPRSS2O15393 492 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 FOXH1O75593 365 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 FCN3O75636 299 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 TFF1P04155 84 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 SFTPBP07988 381 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 DUX4L2P0CJ85 424 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 DUX4L3P0CJ86 424 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 DUX4L4P0CJ87 422 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 DUX4L5P0CJ88 424 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 DUX4L6P0CJ89 424 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 DUX4L7P0CJ90 424 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 CD37P11049 281 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 CALRP27797 417 aaKnown RBP15.11■□□□□ 0.01
LIG1-216ENST00000598938 NPY4RP50391 375 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 WDR25Q64LD2 544 aaPredicted RBP15.11■□□□□ 0.01
LIG1-216ENST00000598938 DUX4L9Q6RFH8 374 aaPredicted RBP15.11■□□□□ 0.01
LIG1-216ENST00000598938 SLC36A1Q7Z2H8 476 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 FAM58AQ8N1B3 248 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 FAM216BQ8N7L0 139 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 PNLDC1Q8NA58 520 aaKnown RBP15.11■□□□□ 0.01
LIG1-216ENST00000598938 SDSLQ96GA7 329 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 SLITRK2Q9H156 845 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 LPAR2Q9HBW0 351 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 HMG20AQ9NP66 347 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 DUX4Q9UBX2 424 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 CLN8Q9UBY8 286 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 STUB1Q9UNE7 303 aa15.11■□□□□ 0.01
LIG1-216ENST00000598938 RFPL4AA6NLU0 287 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 RFPL4AL1F8VTS6 287 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 SIGLEC5O15389 551 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 TGFAP01135 160 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 FGF9P31371 208 aaPredicted RBP15.1■□□□□ 0.01
LIG1-216ENST00000598938 PRDX2P32119 198 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 GABRA2P47869 451 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 DVL1P1P54792 670 aaPredicted RBP15.1■□□□□ 0.01
LIG1-216ENST00000598938 GNB2P62879 340 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 LCN2P80188 198 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 KRTAP24-1Q3LI83 254 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 FAM166AQ6J272 317 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 JAGN1Q8N5M9 183 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 CD177Q8N6Q3 437 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 Q8NFD4 153 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms