RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 DEFA6Q01524 100 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 DYNC1I2Q13409 638 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 GPR176Q14439 515 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 FAM76BQ5HYJ3 339 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 RNF144BQ7Z419 303 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 MOGAT3Q86VF5 341 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 LYPD6Q86Y78 171 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 CALHM1Q8IU99 346 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 ZCCHC24Q8N2G6 241 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 PXT1Q8NFP0 134 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 OR51D1Q8NGF3 324 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 OR51F2Q8NH61 342 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 LGALS14Q8TCE9 139 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 AQP3Q92482 292 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 HPS1Q92902 700 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 ERGIC1Q969X5 290 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 SLAMF9Q96A28 289 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 FAM3DQ96BQ1 224 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 SLIRPQ9GZT3 109 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 C6orf62Q9GZU0 229 aaPredicted RBP10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 TLNRD1Q9H1K6 362 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 CXorf56Q9H5V9 222 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 C1orf123Q9NWV4 160 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 PPP1R3CQ9UQK1 317 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 ETV7Q9Y603 341 aa10.16□□□□□ -0.78
SHKBP1-213ENST00000597325 A0A0B4J203 849 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 LRRC30A6NM36 301 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 RGS5O15539 181 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 SYNGR1O43759 233 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 ANGPTL7O43827 346 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 ZNF780AO75290 641 aaPredicted RBP10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 CRTAPO75718 401 aaPredicted RBP10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 KDM4BO94953 1096 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 PTBP3O95758 552 aaKnown RBP10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 CD37P11049 281 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 SERPINA2P20848 420 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 BMXP51813 675 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 MPPED2Q15777 294 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 SLC22A6Q4U2R8 563 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 FAM166AQ6J272 317 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 FIP1L1Q6UN15 594 aaKnown RBP10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 C12orf54Q6X4T0 127 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 Q8IYB0 196 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 KCNG3Q8TAE7 436 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 NEU4Q8WWR8 484 aaPredicted RBP10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 CEP19Q96LK0 163 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 COMMD3Q9UBI1 195 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 ADAM30Q9UKF2 790 aa10.15□□□□□ -0.78
SHKBP1-213ENST00000597325 CADP27708 2225 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 A0A075B6Q4 140 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 A0A096LNT2 108 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 IFNL4K9M1U5 179 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 RHBDL1O75783 438 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 NXPH2O95156 264 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 HTR3BO95264 441 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 BCL3P20749 454 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 S100A5P33763 92 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 CDKN1AP38936 164 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 FAM189A2Q15884 450 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 C2orf76Q3KRA6 126 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 UBE2NLQ5JXB2 153 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 CRIP3Q6Q6R5 217 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 WDR82Q6UXN9 313 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 OR2W3Q7Z3T1 314 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 C1orf87Q8N0U7 546 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 SAMD12Q8N8I0 201 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 POC1AQ8NBT0 407 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 OR10K1Q8NGX5 313 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 OR10Z1Q8NGY1 313 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 LRRC29Q8WV35 223 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 EMG1Q92979 244 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 FAM46BQ96A09 425 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 SLC25A28Q96A46 364 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 TMEM59Q9BXS4 323 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 MMP27Q9H306 513 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 KCNK15Q9H427 330 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 RHOFQ9HBH0 211 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 GCM1Q9NP62 436 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 IL36GQ9NZH8 169 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 OR5V1Q9UGF6 321 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 SPATA2Q9UM82 520 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 A3GALT2U3KPV4 340 aa10.14□□□□□ -0.79
SHKBP1-213ENST00000597325 IGHV1-69-2A0A0G2JMI3 117 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 TMEM272A0A1B0GTI8 110 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 CLPXO76031 633 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 MPIG6BO95866 241 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 PAHP00439 452 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 PGA5P0DJD9 388 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 VSIG8P0DPA2 414 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 GTF2F2P13984 249 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 SRD5A1P18405 259 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 RAB6AP20340 208 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 HFEQ30201 348 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 SMIM21Q3B7S5 101 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 SPRNQ5BIV9 151 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 ASCL4Q6XD76 172 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 ZNF826PQ6ZT77 177 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 C1QL2Q7Z5L3 287 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 BATF2Q8N1L9 274 aa10.13□□□□□ -0.79
SHKBP1-213ENST00000597325 Q8TCH9 128 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms