RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 IL24Q13007 206 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 EDDM3AQ14507 147 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 ZNF626Q68DY1 528 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 Q6ZSR3 168 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 OR13D1Q8NGV5 346 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 ITFG2Q969R8 447 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 ABCB10Q9NRK6 738 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 CLN6Q9NWW5 311 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 SNX5Q9Y5X3 404 aa12.94□□□□□ -0.34
LIM2-202ENST00000596399 NOTCH3Q9UM47 2321 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 ZNF670-ZNF695F2Z2N8 137 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 MMP23AO75900 390 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 IGHA1P01876 353 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 DUSP1P28562 367 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 GDPD3Q7L5L3 318 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 YIPF7Q8N8F6 280 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 OR11H6Q8NGC7 330 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 OR52N4Q8NGI2 321 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 TMEM163Q8TC26 289 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 MRAPQ8TCY5 172 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 RPS4Y2Q8TD47 263 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 UTP4Q969X6 686 aaKnown RBP12.93□□□□□ -0.34
LIM2-202ENST00000596399 MALSU1Q96EH3 234 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 CEP19Q96LK0 163 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 PKIBQ9C010 78 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 WNT10AQ9GZT5 417 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 CHST6Q9GZX3 395 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 MOB1AQ9H8S9 216 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 POMPQ9Y244 141 aa12.93□□□□□ -0.34
LIM2-202ENST00000596399 TBL2Q9Y4P3 447 aaKnown RBP12.93□□□□□ -0.34
LIM2-202ENST00000596399 A0A1W2PRX2 142 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 CHRM2P08172 466 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 CCL1P22362 96 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 CD24P25063 80 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 ACTA2P62736 377 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 ACTG2P63267 376 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 ACTC1P68032 377 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 ACTA1P68133 377 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 SLX4IPQ5VYV7 408 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 C12orf73Q69YU5 71 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 BAIAP2L2Q6UXY1 529 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 SLC25A26Q70HW3 274 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 CATSPERDQ86XM0 798 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 NDUFA11Q86Y39 141 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 RDH10Q8IZV5 341 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 SGCDQ92629 289 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 FOXRED1Q96CU9 486 aaPredicted RBP12.92□□□□□ -0.34
LIM2-202ENST00000596399 NRBF2Q96F24 287 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 ZNF714Q96N38 554 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 PRSS22Q9GZN4 317 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 KRT84Q9NSB2 600 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 AURKAIP1Q9NWT8 199 aaPredicted RBP12.92□□□□□ -0.34
LIM2-202ENST00000596399 H2AFY2Q9P0M6 372 aaPredicted RBP12.92□□□□□ -0.34
LIM2-202ENST00000596399 DSCAML1Q8TD84 2053 aa12.92□□□□□ -0.34
LIM2-202ENST00000596399 A0A1W2PQL4 384 aaPredicted RBP12.91□□□□□ -0.34
LIM2-202ENST00000596399 ZAR1LA6NP61 321 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 GYG2O15488 501 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 NPBWR2P48146 333 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 SNU13P55769 128 aaKnown RBP12.91□□□□□ -0.34
LIM2-202ENST00000596399 ACTR3P61158 418 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 EMX1Q04741 257 aaPredicted RBP12.91□□□□□ -0.34
LIM2-202ENST00000596399 SLC34A1Q06495 639 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 ARSJQ5FYB0 599 aaPredicted RBP12.91□□□□□ -0.34
LIM2-202ENST00000596399 NXNL2Q5VZ03 156 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 EGFL6Q8IUX8 553 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 OR8H2Q8N162 312 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 PRSS35Q8N3Z0 413 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 ZNF676Q8N7Q3 588 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 OR4S1Q8NGB4 309 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 DNAJC9Q8WXX5 260 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 PHF21AQ96BD5 680 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 SLC7A6OSQ96CW6 309 aaPredicted RBP12.91□□□□□ -0.34
LIM2-202ENST00000596399 RBFOX1Q9NWB1 397 aaKnown RBP12.91□□□□□ -0.34
LIM2-202ENST00000596399 SLC7A11Q9UPY5 501 aa12.91□□□□□ -0.34
LIM2-202ENST00000596399 IGHV2-26A0A0B4J1V2 119 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 DHRS7CA6NNS2 312 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 F2RL2O00254 374 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 SYT7O43581 403 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 PSPNO60542 156 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 PEX14O75381 377 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 RBP4P02753 201 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 KRT8P05787 483 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 GABRR1P24046 479 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 POLR2IP36954 125 aaKnown RBP12.9□□□□□ -0.34
LIM2-202ENST00000596399 OR12D2P58182 307 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 GRK1Q15835 563 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 NDNFQ8TB73 568 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 EMG1Q92979 244 aaKnown RBP12.9□□□□□ -0.34
LIM2-202ENST00000596399 SNX22Q96L94 193 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 MNTQ99583 582 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 OCSTAMPQ9BR26 566 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 PLEKHA1Q9HB21 404 aa12.9□□□□□ -0.34
LIM2-202ENST00000596399 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.9□□□□□ -0.34
LIM2-202ENST00000596399 FAM172BPA6NC97 362 aa12.89□□□□□ -0.35
LIM2-202ENST00000596399 XPNPEP2O43895 674 aa12.89□□□□□ -0.35
LIM2-202ENST00000596399 ALX3O95076 343 aa12.89□□□□□ -0.35
LIM2-202ENST00000596399 HAND1O96004 215 aa12.89□□□□□ -0.35
LIM2-202ENST00000596399 IGLL1P15814 213 aa12.89□□□□□ -0.35
LIM2-202ENST00000596399 HOXB6P17509 224 aaKnown RBP12.89□□□□□ -0.35
LIM2-202ENST00000596399 BCL3P20749 454 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms