RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 RAB12Q6IQ22 244 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 WDR86Q86TI4 376 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 OSR2Q8N2R0 312 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 CELF2-AS1Q8N7Q2 184 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 CHST4Q8NCG5 386 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 TMEM104Q8NE00 496 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 AQP3Q92482 292 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 MRPS24Q96EL2 167 aaKnown RBP11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 LPAR5Q9H1C0 372 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 MS4A5Q9H3V2 200 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 V9GYH0 126 aa11.07□□□□□ -0.64
SHKBP1-209ENST00000595803 VPS13CQ709C8 3753 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 A0A0G2JMP0 313 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 A0A0X1KG70 313 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 C17orf100A8MU93 164 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 TPPPO94811 219 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 BCL3P20749 454 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 MPZP25189 248 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 NPBWR2P48146 333 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 TAS2R20P59543 309 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 RPS27AP62979 156 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 C16orf87Q6PH81 154 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 OR8H2Q8N162 312 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 MUC15Q8N387 334 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 GDPD1Q8N9F7 314 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 ACBD4Q8NC06 268 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 OR4M2Q8NGB6 313 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 OR56B1Q8NGI3 324 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 ITLN1Q8WWA0 313 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 FBXW5Q969U6 566 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 MEGF10Q96KG7 1140 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 FOXC2Q99958 501 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 RHOFQ9HBH0 211 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 UFSP2Q9NUQ7 469 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 C1orf123Q9NWV4 160 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 MTCH1Q9NZJ7 389 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 IL19Q9UHD0 177 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 CADP27708 2225 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 ABCA4P78363 2273 aa11.06□□□□□ -0.64
SHKBP1-209ENST00000595803 hCG_1807616A0A1W2PRN6 198 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 A6NNC1 897 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 RHBDL1O75783 438 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 GOSR1O95249 250 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 SFTPBP07988 381 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 ACAA1P09110 424 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 FOSL1P15407 271 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 CPT2P23786 658 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 MNDAP41218 407 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 SNRPD2P62316 118 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 DCTN2Q13561 401 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 MST1LQ2TV78 715 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 AGAP6Q5VW22 663 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 ELP2Q6IA86 826 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 SNX29P2Q8IUI4 249 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 C11orf53Q8IXP5 236 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 Q8IYB0 196 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 BATF2Q8N1L9 274 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 OR10R2Q8NGX6 335 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 ZFAND2BQ8WV99 257 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 NRGNQ92686 78 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 OR2V2Q96R30 315 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 TM2D1Q9BX74 207 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 SRRQ9GZT4 340 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 EGLN1Q9GZT9 426 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 TLNRD1Q9H1K6 362 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 FN3KRPQ9HA64 309 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 DECR2Q9NUI1 292 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 FAIMQ9NVQ4 179 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 FBXO9Q9UK97 447 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 ST3GAL6Q9Y274 331 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 ATRQ13535 2644 aa11.05□□□□□ -0.64
SHKBP1-209ENST00000595803 HS3ST1O14792 307 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 SOCS1O15524 211 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 AKR7A2O43488 359 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 HLA-DQB1P01920 261 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 CD55P08174 381 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 ADH4P08319 380 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 PRKACAP17612 351 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 TNFRSF1AP19438 455 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 GABRR1P24046 479 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 BLVRBP30043 206 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 FGF12P61328 243 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 MPPED2Q15777 294 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 ZNF79Q15937 498 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 SWI5Q1ZZU3 235 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 MOGAT2Q3SYC2 334 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 CDNFQ49AH0 187 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 ZNF826PQ6ZT77 177 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 Q6ZTK2 550 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 BIVMQ86UB2 503 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 MOGAT3Q86VF5 341 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 FAM58AQ8N1B3 248 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 FAM89BQ8N5H3 189 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 POC1AQ8NBT0 407 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 Q8NFD4 153 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 OR10Z1Q8NGY1 313 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 EMG1Q92979 244 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 ERGIC1Q969X5 290 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 RAB3CQ96E17 227 aa11.04□□□□□ -0.64
SHKBP1-209ENST00000595803 ZNF488Q96MN9 340 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms