RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 OR52N4Q8NGI2 321 aa11.42□□□□□ -0.58
SHKBP1-207ENST00000595631 EMG1Q92979 244 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-207ENST00000595631 Q9H521 79 aa11.42□□□□□ -0.58
SHKBP1-207ENST00000595631 NEK6Q9HC98 313 aa11.42□□□□□ -0.58
SHKBP1-207ENST00000595631 RBFOX1Q9NWB1 397 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-207ENST00000595631 MAB21L2Q9Y586 359 aa11.42□□□□□ -0.58
SHKBP1-207ENST00000595631 NIPBLQ6KC79 2804 aaeCLIP11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 ZFHX3Q15911 3703 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 TRAV8-7A0A075B6U6 113 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 TRBV5-7A0A0A0MS05 114 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 KIR2DS1A0A191URI9 304 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 ZNF879B4DU55 563 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 SIGLEC5O15389 551 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 PIN1P1O15428 100 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 ALX3O95076 343 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 HSMCR30P0CW71 290 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 GATA3P23771 443 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 ZP1P60852 638 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 BDH1Q02338 343 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 PAX8Q06710 450 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 KISS1Q15726 138 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 MKXQ8IYA7 352 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 TMEM185AQ8NFB2 350 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 H1FXQ92522 213 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 DERL3Q96Q80 235 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 TMED9Q9BVK6 235 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 DNTTIP1Q9H147 329 aa11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 SLC25A10Q9UBX3 287 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-207ENST00000595631 NAV3Q8IVL0 2385 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 IGHV3OR16-10A0A075B7F0 116 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 GABRPO00591 440 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 ENSAO43768 121 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 KNG1P01042 644 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 CD1AP06126 327 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 SFTPBP07988 381 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 NDUFB7P17568 137 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 IGFBP3P17936 291 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 DUSP1P28562 367 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 PRDX2P32119 198 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 LRRC10Q5BKY1 277 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 FAM27D1Q5T7N8 215 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 DDI2Q5TDH0 399 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 LIPKQ5VXJ0 399 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 BTNL3Q6UXE8 466 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 C1QL2Q7Z5L3 287 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 SDSLQ96GA7 329 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 MRI1Q9BV20 369 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 RPUSD1Q9UJJ7 312 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 BLOC1S6Q9UL45 172 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 AUP1Q9Y679 476 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 SVEP1Q4LDE5 3571 aa11.4□□□□□ -0.58
SHKBP1-207ENST00000595631 KDM4BO94953 1096 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 CYB5AP00167 134 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 FSHBP01225 129 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 TMEM225BP0DP42 221 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 PRKACAP17612 351 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 OR3A4PP47883 348 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 CAPZA1P52907 286 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 GABARAPL2P60520 117 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 FGF12P61328 243 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 RPS25P62851 125 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 PPP3R1P63098 170 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 COL10A1Q03692 680 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 KLF17Q5JT82 389 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 CD276Q5ZPR3 534 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 FAM58AQ8N1B3 248 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 UFD1Q92890 307 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 MED30Q96HR3 178 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 GPER1Q99527 375 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 DCTN5Q9BTE1 182 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 FAM192AQ9GZU8 254 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 NOX4Q9NPH5 578 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 CUBNO60494 3623 aa11.39□□□□□ -0.59
SHKBP1-207ENST00000595631 MAGEB3O15480 346 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 RGS9O75916 674 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 MAS1P04201 325 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 IGHV4-38-2P0DP08 117 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 FSTP19883 344 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 BDKRB2P30411 391 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 TGFBR2P37173 567 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 GP2P55259 537 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 SRSF2Q01130 221 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 PRB3Q04118 309 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 EMX1Q04741 257 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 TBCEQ15813 527 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 ACSM3Q53FZ2 586 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 ARMCX4Q5H9R4 360 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 OR10K1Q8NGX5 313 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 TNFAIP8L1Q8WVP5 186 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 TMEM203Q969S6 136 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 MGLLQ99685 303 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 PPIL3Q9H2H8 161 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 TMEM138Q9NPI0 162 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 ACOT13Q9NPJ3 140 aa11.38□□□□□ -0.59
SHKBP1-207ENST00000595631 TMEM82A0PJX8 343 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 GPX5O75715 221 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 CDRT1O95170 752 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 ECDO95905 644 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 HAND1O96004 215 aa11.37□□□□□ -0.59
SHKBP1-207ENST00000595631 ALDOBP05062 364 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms