RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ANKRD20A5PA0PJZ0 165 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 HMX3A6NHT5 357 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 ORC5O43913 435 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 DOK2O60496 412 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 BPNT1O95861 308 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 MMP7P09237 267 aaPredicted RBP10.83□□□□□ -0.68
SCAF1-202ENST00000595242 CECR9P0C854 216 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 ARSBP15848 533 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 ZNF20P17024 532 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 GCH1P30793 250 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 CALCRP30988 508 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 EFNB2P52799 333 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 RAG2P55895 527 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 HGFACQ04756 655 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 UTS2BQ765I0 119 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 IZUMO1Q8IYV9 350 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 LRRC18Q8N456 261 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 SIGLECL1Q8N7X8 197 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 OR52H1Q8NGJ2 320 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 OR52I2Q8NH67 350 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 OR1F12Q8NHA8 337 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 FCAMRQ8WWV6 532 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 TAF15Q92804 592 aaKnown RBP eCLIP10.83□□□□□ -0.68
SCAF1-202ENST00000595242 PGAM5Q96HS1 289 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 LYZL4Q96KX0 146 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 NUDT16L1Q9BRJ7 211 aaKnown RBP10.83□□□□□ -0.68
SCAF1-202ENST00000595242 DPAGT1Q9H3H5 408 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 OBP2BQ9NPH6 170 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 CGGBP1Q9UFW8 167 aaPredicted RBP10.83□□□□□ -0.68
SCAF1-202ENST00000595242 ZNF391Q9UJN7 358 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 MRPS7Q9Y2R9 242 aaKnown RBP10.83□□□□□ -0.68
SCAF1-202ENST00000595242 TIMM10BQ9Y5J6 103 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 NUBP2Q9Y5Y2 271 aa10.83□□□□□ -0.68
SCAF1-202ENST00000595242 DNAJC9-AS1A6NH13 148 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 SULT1C2O00338 296 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 DHRS3O75911 302 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 SCGNO76038 276 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 GSTT2BP0CG30 244 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 SLC2A1P11166 492 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 ZNF32P17041 273 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 TPTEP56180 551 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 QRFPP83859 136 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 CD300CQ08708 224 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 RSBN1Q5VWQ0 802 aaPredicted RBP10.82□□□□□ -0.68
SCAF1-202ENST00000595242 OR2W3Q7Z3T1 314 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 C1QL4Q86Z23 238 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 JAGN1Q8N5M9 183 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 OR4D6Q8NGJ1 314 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 OR13C9Q8NGT0 318 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 PP6455Q8WZ26 134 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 BOD1Q96IK1 185 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 OR2H1Q9GZK4 316 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 WNT5BQ9H1J7 359 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 ZMAT3Q9HA38 289 aaKnown RBP10.82□□□□□ -0.68
SCAF1-202ENST00000595242 MTFP1Q9UDX5 166 aa10.82□□□□□ -0.68
SCAF1-202ENST00000595242 C7orf66A4D0T2 115 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 INMT-MINDY4F8WBC2 141 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 J3QLI3 93 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 PPIHO43447 177 aaKnown RBP10.81□□□□□ -0.68
SCAF1-202ENST00000595242 KDM4BO94953 1096 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 FARS2O95363 451 aaKnown RBP10.81□□□□□ -0.68
SCAF1-202ENST00000595242 HPXP02790 462 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 COX5BP10606 129 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 B4GALT1P15291 398 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 MDKP21741 143 aaPredicted RBP10.81□□□□□ -0.68
SCAF1-202ENST00000595242 GNALP38405 381 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 ALDH3B1P43353 468 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 SRP9P49458 86 aaKnown RBP10.81□□□□□ -0.68
SCAF1-202ENST00000595242 GSK3AP49840 483 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 TMEM33P57088 247 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 GALK2Q01415 458 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 SRSF4Q08170 494 aaKnown RBP10.81□□□□□ -0.68
SCAF1-202ENST00000595242 TATDN3Q17R31 274 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 C3orf36Q3SXR2 165 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 TBRG1Q3YBR2 411 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 DCAF12L2Q5VW00 463 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 KRT74Q7RTS7 529 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 OR52N4Q8NGI2 321 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 OR6F1Q8NGZ6 308 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 SLC7A6Q92536 515 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 RDH5Q92781 318 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 DVL3Q92997 716 aaPredicted RBP10.81□□□□□ -0.68
SCAF1-202ENST00000595242 ITFG2Q969R8 447 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 C1orf147Q96MC9 270 aaPredicted RBP10.81□□□□□ -0.68
SCAF1-202ENST00000595242 CHST5Q9GZS9 411 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 OR10A2Q9H208 303 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 CNTD2Q9H8S5 307 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 SCPEP1Q9HB40 452 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 TAS2R8Q9NYW2 309 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 ZNF107Q9UII5 783 aaPredicted RBP10.81□□□□□ -0.68
SCAF1-202ENST00000595242 RAB22AQ9UL26 194 aa10.81□□□□□ -0.68
SCAF1-202ENST00000595242 C5orf63A6NC05 138 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 TMEM14DPA8MWL7 114 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 ZNF587BE7ETH6 402 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 F5H5K5 113 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 MTRF1O75570 445 aaKnown RBP10.8□□□□□ -0.68
SCAF1-202ENST00000595242 FSHBP01225 129 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 IGLV1-44P01699 117 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 TCRBP04435 133 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 UBBP0CG47 229 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms