RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 YPEL4Q96NS1 127 aa11.53□□□□□ -0.56
VRK3-209ENST00000594948 FAAP24Q9BTP7 215 aa11.53□□□□□ -0.56
VRK3-209ENST00000594948 RSRP1Q9BUV0 290 aa11.53□□□□□ -0.56
VRK3-209ENST00000594948 C11orf1Q9H5F2 150 aa11.53□□□□□ -0.56
VRK3-209ENST00000594948 UNKLQ9H9P5 680 aaKnown RBP11.53□□□□□ -0.56
VRK3-209ENST00000594948 ZNF286AQ9HBT8 521 aa11.53□□□□□ -0.56
VRK3-209ENST00000594948 ZNF391Q9UJN7 358 aa11.53□□□□□ -0.56
VRK3-209ENST00000594948 ZDHHC8Q9ULC8 765 aa11.53□□□□□ -0.56
VRK3-209ENST00000594948 IFNA17P01571 189 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 EIF2S3P41091 472 aaKnown RBP11.52□□□□□ -0.57
VRK3-209ENST00000594948 AKR1C3P42330 323 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 MRPS34P82930 218 aaKnown RBP11.52□□□□□ -0.57
VRK3-209ENST00000594948 RAB35Q15286 201 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 KRBOX4Q5JUW0 171 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 FAM27BQ5VT28 67 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 LYZL2Q7Z4W2 148 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 DTX1Q86Y01 620 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 RASL10BQ96S79 203 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 MESP1Q9BRJ9 268 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 BCO1Q9HAY6 547 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 SLC2A9Q9NRM0 540 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 GPR173Q9NS66 373 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 FOXD3Q9UJU5 478 aaPredicted RBP11.52□□□□□ -0.57
VRK3-209ENST00000594948 TCFL5Q9UL49 500 aa11.52□□□□□ -0.57
VRK3-209ENST00000594948 RCL1Q9Y2P8 373 aaKnown RBP11.52□□□□□ -0.57
VRK3-209ENST00000594948 PTRH2Q9Y3E5 179 aaKnown RBP11.52□□□□□ -0.57
VRK3-209ENST00000594948 A0A1W2PPE3 182 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 LINC00587B1AMM8 73 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 PRH1P02810 166 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 CD63P08962 238 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 OR8U8P0C7N1 319 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 KLK2P20151 261 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 ZNF266Q14584 549 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 ZNF385CQ66K41 422 aaPredicted RBP11.51□□□□□ -0.57
VRK3-209ENST00000594948 TMEM42Q69YG0 159 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 ZNF100Q8IYN0 542 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 TOMM40LQ969M1 308 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 DEFB126Q9BYW3 111 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 TMPRSS5Q9H3S3 457 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 NPIPA2E9PIF3 369 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 NPIPA3F8WFD2 350 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 RBP2P50120 134 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 EWSR1Q01844 656 aaKnown RBP eCLIP11.51□□□□□ -0.57
VRK3-209ENST00000594948 GNMTQ14749 295 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 TAF9Q16594 264 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 MAML2Q8IZL2 1156 aaPredicted RBP11.51□□□□□ -0.57
VRK3-209ENST00000594948 BOD1Q96IK1 185 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 SPSB2Q99619 263 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 PARP12Q9H0J9 701 aaKnown RBP11.51□□□□□ -0.57
VRK3-209ENST00000594948 NIT2Q9NQR4 276 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 PLEK2Q9NYT0 353 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 NXT1Q9UKK6 140 aaKnown RBP11.51□□□□□ -0.57
VRK3-209ENST00000594948 CHCHD2Q9Y6H1 151 aaPredicted RBP11.51□□□□□ -0.57
VRK3-209ENST00000594948 SPAG17Q6Q759 2223 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 ASXL3Q9C0F0 2248 aa11.51□□□□□ -0.57
VRK3-209ENST00000594948 DUXBA0A1W2PPF3 345 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 PITX3O75364 302 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 SCRG1O75711 98 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 DIRAS3O95661 229 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 MMP9P14780 707 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 PNLIPP16233 465 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 AFF3P51826 1226 aaKnown RBP11.5□□□□□ -0.57
VRK3-209ENST00000594948 SNAI3Q3KNW1 292 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 KRTAP27-1Q3LI81 207 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 SP6Q3SY56 376 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 HIKESHIQ53FT3 197 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 TMEM211Q6ICI0 200 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 C20orf196Q8IYI0 205 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 SLC25A45Q8N413 288 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 ZNF565Q8N9K5 539 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 OR52M1Q8NGK5 317 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 ISOC2Q96AB3 205 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 TECTBQ96PL2 329 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 SPIN2AQ99865 258 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 SPIN2BQ9BPZ2 258 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 HIPK2Q9H2X6 1198 aa11.5□□□□□ -0.57
VRK3-209ENST00000594948 A0A087WWC5 75 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 CCDC187A0A096LP49 1063 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 hCG_1809904A0A1W2PP81 198 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 A0A1W2PR64 198 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 A0A1W2PRV1 198 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 XRCC2O43543 280 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 DNPH1O43598 174 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 CST2P09228 141 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 SRFP11831 508 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 CBR1P16152 277 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 RRADP55042 308 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 RND3P61587 244 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 COL19A1Q14993 1142 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 SRSF7Q16629 238 aaKnown RBP eCLIP11.49□□□□□ -0.57
VRK3-209ENST00000594948 DMRTC1Q5HYR2 192 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 SOHLH1Q5JUK2 328 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 SLC22A25Q6T423 547 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 HEPN1Q6WQI6 88 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 Q6ZS49 121 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 OSR2Q8N2R0 312 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 GPR137CQ8N3F9 429 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 FAM24BQ8N5W8 94 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 OR2C3Q8N628 320 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms