RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 DPAGT1Q9H3H5 408 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 RHOFQ9HBH0 211 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 AMBNQ9NP70 447 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 FGF20Q9NP95 211 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 AASSQ9UDR5 926 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 OR14J1Q9UGF5 321 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 MYRFQ9Y2G1 1151 aa14.57□□□□□ -0.08
SHKBP1-204ENST00000594862 BTBD17A6NE02 478 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 H0YAE9 185 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 NPFFO15130 113 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 TFF1P04155 84 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 TK1P04183 234 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 DCKP27707 260 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 UBE2E1P51965 193 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 MTCP1P56278 107 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 CCDC58Q4VC31 144 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 SPIN3Q5JUX0 258 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 ZNF691Q5VV52 312 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 TMPRSS11AQ6ZMR5 421 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 OR5AK2Q8NH90 309 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 EMG1Q92979 244 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 VCXQ9H320 206 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 ELL3Q9HB65 397 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 MTCH1Q9NZJ7 389 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 GLS2Q9UI32 602 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 SF3B6Q9Y3B4 125 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 PCDHGB5Q9Y5G0 923 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 SOX21Q9Y651 276 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 HSPE1-MOB4S4R3N1 261 aa14.56□□□□□ -0.08
SHKBP1-204ENST00000594862 IGKV1-27A0A075B6S5 117 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 TRBV2A0A0J9YWF9 115 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 A0A0U1RQK1 487 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 A0A1B0GUS0 222 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 POM121CA8CG34 1229 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 RNASEK-C17orf49H0YIS7 233 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 K7N7A8 449 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 ALX3O95076 343 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 PAHP00439 452 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 MYL12AP19105 171 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 DHRSXQ8N5I4 330 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 ASCC1Q8N9N2 400 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 OR5D14Q8NGL3 314 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 CYGBQ8WWM9 190 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 DYRK2Q92630 601 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 TNFRSF14Q92956 283 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 SLAMF9Q96A28 289 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 DHDHQ9UQ10 334 aa14.55□□□□□ -0.08
SHKBP1-204ENST00000594862 IGKV1-9A0A0C4DH69 117 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 WBP4O75554 376 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 ZFPL1O95159 310 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 POU3F4P49335 361 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 MIDNQ504T8 468 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 GDPD3Q7L5L3 318 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 SERPINA12Q8IW75 414 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 PDZD9Q8IXQ8 264 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 SAXO1Q8IYX7 474 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 PIP4P2Q8N4L2 257 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 ZSCAN4Q8NAM6 433 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 PPP1R35Q8TAP8 253 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 TSEN15Q8WW01 171 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 ZCCHC4Q9H5U6 513 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 HEXA-AS1Q9H8Q6 139 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 ISG20L2Q9H9L3 353 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 C19orf12Q9NSK7 152 aa14.54□□□□□ -0.08
SHKBP1-204ENST00000594862 RBP4P02753 201 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 CD2P06729 351 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 PEX2P28328 305 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 IER3P46695 156 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 CEBPDP49716 269 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 ERVFRD-1P60508 538 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 COL10A1Q03692 680 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 PDZK1IP1Q13113 114 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 LRRC36Q1X8D7 754 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 RPL22L1Q6P5R6 122 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 SHISA2Q6UWI4 295 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 GDPGP1Q6ZNW5 385 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 OR8H2Q8N162 312 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 FAM58AQ8N1B3 248 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 PARP16Q8N5Y8 322 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 OR51A4Q8NGJ6 313 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 OR13C9Q8NGT0 318 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 OR4F5Q8NH21 305 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 SGMS2Q8NHU3 365 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 SNX22Q96L94 193 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 ZNF649Q9BS31 505 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 ZNF747Q9BV97 191 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 CHIAQ9BZP6 476 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 CHCHD3Q9NX63 227 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 ZNRD1Q9P1U0 126 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 DIMT1Q9UNQ2 313 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 EXOSC1Q9Y3B2 195 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 MMP24Q9Y5R2 645 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 TENM1Q9UKZ4 2725 aa14.53□□□□□ -0.08
SHKBP1-204ENST00000594862 MEIOCA2RUB1 952 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 SULT1B1O43704 296 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 ZNF737O75373 536 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 NDUFA7O95182 113 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 HAND1O96004 215 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 LIMS3P0CW19 117 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 LIMS4P0CW20 117 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms