RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 Q8NFD4 153 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 PPP1R14BQ96C90 147 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 MARVELD1Q9BSK0 173 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 CACNG6Q9BXT2 260 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 NKIRAS2Q9NYR9 191 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 TAAR3PQ9P1P4 343 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 POU2F3Q9UKI9 436 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 ELF5Q9UKW6 265 aaPredicted RBP12.9□□□□□ -0.34
VRK3-207ENST00000594092 NUBP2Q9Y5Y2 271 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 ZSCAN5BA6NJL1 495 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 FOXI3A8MTJ6 420 aaPredicted RBP12.9□□□□□ -0.34
VRK3-207ENST00000594092 SIAH2O43255 324 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 CD3EP07766 207 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 AKAIN1P0CW23 69 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 TAS2R19P59542 299 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 GNG2P59768 71 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 MAB21L1Q13394 359 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 ARL6IP1Q15041 203 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 ADIPOQQ15848 244 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 PNLIPRP3Q17RR3 467 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 PLAC9Q5JTB6 97 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 TRAPPC6BQ86SZ2 158 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 RTN4RL2Q86UN3 420 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 FBXL14Q8N1E6 418 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 OSR2Q8N2R0 312 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 SCCPDHQ8NBX0 429 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 MRPS24Q96EL2 167 aaKnown RBP12.9□□□□□ -0.34
VRK3-207ENST00000594092 MCUBQ9NWR8 336 aa12.9□□□□□ -0.34
VRK3-207ENST00000594092 ZNF107Q9UII5 783 aaPredicted RBP12.9□□□□□ -0.34
VRK3-207ENST00000594092 IGHV3-64DA0A0J9YX35 117 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 F8VVB4 439 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 F8VWA3 439 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 TRAPPC2LH3BP13 241 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 RHBDL1O75783 438 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 TCRBP04435 133 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 GRPP07492 148 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 GABRR1P24046 479 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 BLVRBP30043 206 aaPredicted RBP12.89□□□□□ -0.35
VRK3-207ENST00000594092 RCVRNP35243 200 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 CCR6P51684 374 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 PIGYQ3MUY2 71 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 BEX5Q5H9J7 111 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 ELP2Q6IA86 826 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 TMEM229BQ8NBD8 167 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 OR2Z1Q8NG97 314 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 ARHGAP5-AS1Q96IT6 56 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 ICE1Q9Y2F5 2266 aa12.89□□□□□ -0.35
VRK3-207ENST00000594092 ROS1P08922 2347 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 PLSCR5A0PG75 271 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 INMT-MINDY4F8WBC2 141 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 MFNGO00587 321 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 OR4A8P0C604 315 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 TAF9Q16594 264 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 SFRP4Q6FHJ7 346 aaPredicted RBP12.88□□□□□ -0.35
VRK3-207ENST00000594092 ZNF554Q86TJ5 538 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 OR4C16Q8NGL9 310 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 NUDCD2Q8WVJ2 157 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 NEUROG1Q92886 237 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 ZNF488Q96MN9 340 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 HS3ST6Q96QI5 342 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 IFT46Q9NQC8 304 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.88□□□□□ -0.35
VRK3-207ENST00000594092 ST3GAL6Q9Y274 331 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 DEFB108AA8MXU0 73 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 E7EQL1 145 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 CDIPTO14735 213 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 AKR7A2O43488 359 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 RBM11P57052 281 aaKnown RBP12.88□□□□□ -0.35
VRK3-207ENST00000594092 BTG1P62324 171 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 NKPD1Q17RQ9 610 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 AGAP6Q5VW22 663 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 FAAP20Q6NZ36 180 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 STEAP1BQ6NZ63 245 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 CYYR1Q96J86 154 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 TLNRD1Q9H1K6 362 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 PLK3Q9H4B4 646 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 NUDT15Q9NV35 164 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 KCNK7Q9Y2U2 307 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 RNF115Q9Y4L5 304 aa12.88□□□□□ -0.35
VRK3-207ENST00000594092 ZNF462Q96JM2 2506 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 TRAV6A0A075B6T7 132 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 SERPINE3A8MV23 424 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 GEMIN2O14893 280 aaKnown RBP12.87□□□□□ -0.35
VRK3-207ENST00000594092 PLAUP00749 431 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 CD3DP04234 171 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 FCER2P06734 321 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 LOXP28300 417 aaPredicted RBP12.87□□□□□ -0.35
VRK3-207ENST00000594092 CD200P41217 278 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 FGF12P61328 243 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 MZT1Q08AG7 82 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 ARFRP1Q13795 201 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 DAZAP2Q15038 168 aaPredicted RBP12.87□□□□□ -0.35
VRK3-207ENST00000594092 CARTPTQ16568 116 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 TATDN3Q17R31 274 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 PRAMEF6Q5VXH4 476 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 SIGIRRQ6IA17 410 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 ZNF782Q6ZMW2 699 aaPredicted RBP12.87□□□□□ -0.35
VRK3-207ENST00000594092 BTN2A1Q7KYR7 527 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 C11orf53Q8IXP5 236 aa12.87□□□□□ -0.35
VRK3-207ENST00000594092 ELMOD3Q96FG2 381 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms