RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SLC29A1Q99808 456 aa11.95□□□□□ -0.5
PNKP-202ENST00000593706 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.95□□□□□ -0.5
PNKP-202ENST00000593706 ENPP5Q9UJA9 477 aa11.95□□□□□ -0.5
PNKP-202ENST00000593706 PQLC2LA1A4F0 135 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 RFPL4AA6NLU0 287 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 RFPL4AL1F8VTS6 287 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 KRT8P05787 483 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 ERVFRD-1P60508 538 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 HABP2Q14520 560 aaPredicted RBP11.94□□□□□ -0.5
PNKP-202ENST00000593706 ZIK1Q3SY52 487 aaPredicted RBP11.94□□□□□ -0.5
PNKP-202ENST00000593706 OXLD1Q5BKU9 147 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 ZNF782Q6ZMW2 699 aaPredicted RBP11.94□□□□□ -0.5
PNKP-202ENST00000593706 ACP7Q6ZNF0 438 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 MOB3CQ70IA8 216 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 ZNF561Q8N587 486 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 YIPF7Q8N8F6 280 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 R3HDM4Q96D70 268 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 ABCB10Q9NRK6 738 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 IMPAD1Q9NX62 359 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 RASL12Q9NYN1 266 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.94□□□□□ -0.5
PNKP-202ENST00000593706 ORC6Q9Y5N6 252 aa11.94□□□□□ -0.5
PNKP-202ENST00000593706 KIAA2026Q5HYC2 2103 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 DLGAP1O14490 977 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 MTRF1O75570 445 aaKnown RBP11.93□□□□□ -0.5
PNKP-202ENST00000593706 RPP14O95059 124 aaKnown RBP11.93□□□□□ -0.5
PNKP-202ENST00000593706 NRASP01111 189 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 CCL3L1P16619 93 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 KIR3DL2P43630 455 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 CEBPDP49716 269 aaPredicted RBP11.93□□□□□ -0.5
PNKP-202ENST00000593706 EMX1Q04741 257 aaPredicted RBP11.93□□□□□ -0.5
PNKP-202ENST00000593706 CLVS2Q5SYC1 327 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 TMEM200BQ69YZ2 307 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 C10orf67Q8IYJ2 551 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 POC1AQ8NBT0 407 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 OR4F17Q8NGA8 305 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 OR4M1Q8NGD0 313 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 FOXRED1Q96CU9 486 aaPredicted RBP11.93□□□□□ -0.5
PNKP-202ENST00000593706 RNFT2Q96EX2 444 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 ZNF488Q96MN9 340 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 OR4F4Q96R69 305 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 C9orf16Q9BUW7 83 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 MMP28Q9H239 520 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 ZNF702PQ9H963 129 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 NECAP2Q9NVZ3 263 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 AASSQ9UDR5 926 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 GTF2A1LQ9UNN4 478 aa11.93□□□□□ -0.5
PNKP-202ENST00000593706 KMT2CQ8NEZ4 4911 aaKnown RBP11.92□□□□□ -0.5
PNKP-202ENST00000593706 NXPH2O95156 264 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 CD28P10747 220 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 PIPP12273 146 aaPredicted RBP11.92□□□□□ -0.5
PNKP-202ENST00000593706 MPZP25189 248 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 HAAOP46952 286 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 TP53I3Q53FA7 332 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 MEDAGQ5VYS4 303 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 FDX2Q6P4F2 183 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 LHFPL4Q7Z7J7 247 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 TMEM219Q86XT9 240 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 NDUFA11Q86Y39 141 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 CD177Q8N6Q3 437 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 RHOXF1Q8NHV9 184 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 RPS4Y2Q8TD47 263 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 ZNF649Q9BS31 505 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 GPR173Q9NS66 373 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 OR14J1Q9UGF5 321 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 PITPNC1Q9UKF7 332 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 TCF19Q9Y242 345 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 EXOGQ9Y2C4 368 aaKnown RBP11.92□□□□□ -0.5
PNKP-202ENST00000593706 POLDIP2Q9Y2S7 368 aa11.92□□□□□ -0.5
PNKP-202ENST00000593706 LOC107986453A0A1B0GWG9 222 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 A6NIN4 97 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 J3QT63 122 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 SLC16A6O15403 523 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 SYNGR1O43759 233 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 NOS1APO75052 506 aaPredicted RBP11.91□□□□□ -0.5
PNKP-202ENST00000593706 ARG1P05089 322 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 PGA5P0DJD9 388 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 PRDX2P32119 198 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 LOXL3P58215 753 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 ACTC1P68032 377 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 ACTA1P68133 377 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 ZNF91Q05481 1191 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 ZNF273Q14593 569 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 CNN3Q15417 329 aaKnown RBP11.91□□□□□ -0.5
PNKP-202ENST00000593706 ZNF573Q86YE8 665 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 BATF2Q8N1L9 274 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 PIFOQ8TCI5 191 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 APH1BQ8WW43 257 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 PHF21AQ96BD5 680 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 LGALS12Q96DT0 336 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 OR5M11Q96RB7 305 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 CITED2Q99967 270 aaPredicted RBP11.91□□□□□ -0.5
PNKP-202ENST00000593706 NRIP2Q9BQI9 281 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 HES4Q9HCC6 221 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 SERTAD4Q9NUC0 356 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 AURKAIP1Q9NWT8 199 aaPredicted RBP11.91□□□□□ -0.5
PNKP-202ENST00000593706 GNG8Q9UK08 70 aa11.91□□□□□ -0.5
PNKP-202ENST00000593706 VGLL3A8MV65 326 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 DBTP11182 482 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms