RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TMEM219Q86XT9 240 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 NDUFA11Q86Y39 141 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 LYG1Q8N1E2 194 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 TCEANCQ8N8B7 351 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 UTP4Q969X6 686 aaKnown RBP19.29■□□□□ 0.68
LSM4-202ENST00000593564 CEP19Q96LK0 163 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 POMPQ9Y244 141 aa19.29■□□□□ 0.68
LSM4-202ENST00000593564 FAM230AA0A1W2PPH8 454 aa19.28■□□□□ 0.68
LSM4-202ENST00000593564 GYG2O15488 501 aa19.28■□□□□ 0.68
LSM4-202ENST00000593564 DYNLT3P51808 116 aa19.28■□□□□ 0.68
LSM4-202ENST00000593564 EDDM3BP56851 147 aa19.28■□□□□ 0.68
LSM4-202ENST00000593564 MEF2CQ06413 473 aaPredicted RBP19.28■□□□□ 0.68
LSM4-202ENST00000593564 C12orf73Q69YU5 71 aa19.28■□□□□ 0.68
LSM4-202ENST00000593564 GID4Q8IVV7 300 aa19.28■□□□□ 0.68
LSM4-202ENST00000593564 OR8H2Q8N162 312 aa19.28■□□□□ 0.68
LSM4-202ENST00000593564 PRSS22Q9GZN4 317 aa19.28■□□□□ 0.68
LSM4-202ENST00000593564 PLEKHA1Q9HB21 404 aa19.28■□□□□ 0.68
LSM4-202ENST00000593564 MTCH1Q9NZJ7 389 aa19.28■□□□□ 0.68
LSM4-202ENST00000593564 DNAH3Q8TD57 4116 aa19.28■□□□□ 0.68
LSM4-202ENST00000593564 ZAR1LA6NP61 321 aa19.27■□□□□ 0.68
LSM4-202ENST00000593564 F8VVB4 439 aa19.27■□□□□ 0.68
LSM4-202ENST00000593564 F8VWA3 439 aa19.27■□□□□ 0.68
LSM4-202ENST00000593564 RPP14O95059 124 aaKnown RBP19.27■□□□□ 0.68
LSM4-202ENST00000593564 EPHA2P29317 976 aa19.27■□□□□ 0.68
LSM4-202ENST00000593564 SSX6Q7RTT6 188 aa19.27■□□□□ 0.68
LSM4-202ENST00000593564 TCF23Q7RTU1 214 aa19.27■□□□□ 0.68
LSM4-202ENST00000593564 ZNF714Q96N38 554 aa19.27■□□□□ 0.68
LSM4-202ENST00000593564 CADM1Q9BY67 442 aaKnown RBP19.27■□□□□ 0.68
LSM4-202ENST00000593564 WNT10AQ9GZT5 417 aa19.27■□□□□ 0.68
LSM4-202ENST00000593564 MMP28Q9H239 520 aa19.27■□□□□ 0.68
LSM4-202ENST00000593564 KRT84Q9NSB2 600 aa19.27■□□□□ 0.68
LSM4-202ENST00000593564 IGKV1-27A0A075B6S5 117 aa19.26■□□□□ 0.67
LSM4-202ENST00000593564 MEX3AA1L020 520 aaKnown RBP19.26■□□□□ 0.67
LSM4-202ENST00000593564 PIN1P1O15428 100 aa19.26■□□□□ 0.67
LSM4-202ENST00000593564 SYT7O43581 403 aa19.26■□□□□ 0.67
LSM4-202ENST00000593564 MITFO75030 526 aaPredicted RBP19.26■□□□□ 0.67
LSM4-202ENST00000593564 KRT8P05787 483 aa19.26■□□□□ 0.67
LSM4-202ENST00000593564 DYNC1I2Q13409 638 aaKnown RBP19.26■□□□□ 0.67
LSM4-202ENST00000593564 UBE2V2Q15819 145 aa19.26■□□□□ 0.67
LSM4-202ENST00000593564 CATSPERDQ86XM0 798 aa19.26■□□□□ 0.67
LSM4-202ENST00000593564 YIPF7Q8N8F6 280 aa19.26■□□□□ 0.67
LSM4-202ENST00000593564 OR4F17Q8NGA8 305 aa19.26■□□□□ 0.67
LSM4-202ENST00000593564 SNX22Q96L94 193 aa19.26■□□□□ 0.67
LSM4-202ENST00000593564 OR4F4Q96R69 305 aa19.26■□□□□ 0.67
LSM4-202ENST00000593564 TMEM82A0PJX8 343 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 ADARB2-AS1A8MUL3 147 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 GATBO75879 557 aaKnown RBP19.25■□□□□ 0.67
LSM4-202ENST00000593564 FUT6P51993 359 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 OR12D2P58182 307 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 ODF4Q2M2E3 257 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 OXLD1Q5BKU9 147 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 MINOS1Q5TGZ0 78 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 CCDC54Q8NEL0 328 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 SLAMF9Q96A28 289 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 R3HDM4Q96D70 268 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 IL4I1Q96RQ9 567 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 CITED2Q99967 270 aaPredicted RBP19.25■□□□□ 0.67
LSM4-202ENST00000593564 CHST5Q9GZS9 411 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 SEBOXQ9HB31 216 aaPredicted RBP19.25■□□□□ 0.67
LSM4-202ENST00000593564 MINOS1-NBL1R4GNA1 71 aa19.25■□□□□ 0.67
LSM4-202ENST00000593564 DSCAML1Q8TD84 2053 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 hADV38S2A0JD32 116 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 F2RL2O00254 374 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 PEX14O75381 377 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 ACTA2P62736 377 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 ACTG2P63267 376 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 ACTC1P68032 377 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 ACTA1P68133 377 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 SLC25A26Q70HW3 274 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 TBX5Q99593 518 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 WARS2Q9UGM6 360 aaKnown RBP19.24■□□□□ 0.67
LSM4-202ENST00000593564 LINC00312Q9Y6C7 94 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 SESN1Q9Y6P5 492 aa19.24■□□□□ 0.67
LSM4-202ENST00000593564 A0A1W2PQL4 384 aaPredicted RBP19.23■□□□□ 0.67
LSM4-202ENST00000593564 OR2T7P0C7T2 308 aa19.23■□□□□ 0.67
LSM4-202ENST00000593564 EDDM3AQ14507 147 aa19.23■□□□□ 0.67
LSM4-202ENST00000593564 KDM4DQ6B0I6 523 aa19.23■□□□□ 0.67
LSM4-202ENST00000593564 EGFL6Q8IUX8 553 aa19.23■□□□□ 0.67
LSM4-202ENST00000593564 SLC7A6OSQ96CW6 309 aaPredicted RBP19.23■□□□□ 0.67
LSM4-202ENST00000593564 NECAP2Q9NVZ3 263 aa19.23■□□□□ 0.67
LSM4-202ENST00000593564 ZNF281Q9Y2X9 895 aa19.23■□□□□ 0.67
LSM4-202ENST00000593564 HILPDAQ9Y5L2 63 aa19.23■□□□□ 0.67
LSM4-202ENST00000593564 IGHV2-26A0A0B4J1V2 119 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 METTL15A6NJ78 407 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 G3V2T6 193 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 H3BSH0 61 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 SULT1C4O75897 302 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 DNAJC8O75937 253 aaPredicted RBP19.22■□□□□ 0.67
LSM4-202ENST00000593564 HAND1O96004 215 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 SERPINA3P01011 423 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 ALDOBP05062 364 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 BLCAPP62952 87 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 ATP6AP1Q15904 470 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 Q6ZS46 218 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 Q8IYB0 196 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 ENTHD1Q8IYW4 607 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 ZNF676Q8N7Q3 588 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 EMG1Q92979 244 aaKnown RBP19.22■□□□□ 0.67
LSM4-202ENST00000593564 C10orf35Q96D05 121 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 BORCS8Q96FH0 119 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms