RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	ZNF254	O75437	659 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	MMP23A	O75900	390 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	PF4	P02776	101 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	HMGN1	P05114	100 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	CD24	P25063	80 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	AZGP1	P25311	298 aa	Known RBP	14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	HOXD3	P31249	432 aa	Predicted RBP	14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	IL24	Q13007	206 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	ZNF829	Q3KNS6	432 aa	Predicted RBP	14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	FAM98B	Q52LJ0	330 aa	Known RBP	14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	LCN1P1	Q5VSP4	162 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	DHFR2	Q86XF0	187 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	OR8H2	Q8N162	312 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	TPRX1	Q8N7U7	411 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	OR4P4	Q8NGL7	312 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	NSL1	Q96IY1	281 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	PKIB	Q9C010	78 aa		14.59	□□□□□ -0.07
CIRBP-238	ENST00000592412	IGKV1-27	A0A075B6S5	117 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	AMY1A	P04745	511 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	AMY2A	P04746	511 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	RAP2A	P10114	183 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	OSM	P13725	252 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	RIDA	P52758	137 aa	Known RBP	14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	TRIM25	Q14258	630 aa	Known RBP	14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	GK3P	Q14409	553 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	BAIAP2L2	Q6UXY1	529 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	PLEKHG7	Q6ZR37	379 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	GDPD3	Q7L5L3	318 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	ELMOD2	Q8IZ81	293 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	ZNF676	Q8N7Q3	588 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	LINC00482	Q8N8I6	264 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	OR52N4	Q8NGI2	321 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	NDNF	Q8TB73	568 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	IL36RN	Q9UBH0	155 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	DNAJB9	Q9UBS3	223 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	SESN1	Q9Y6P5	492 aa		14.58	□□□□□ -0.08
CIRBP-238	ENST00000592412	RYR2	Q92736	4967 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	SACS	Q9NZJ4	4579 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	SH2D7	A6NKC9	451 aa	Predicted RBP	14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412		B2RBV5	119 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	CST1	P01037	141 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	LPL	P06858	475 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	CHRM2	P08172	466 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	ESRRG	P62508	458 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	MEF2C	Q06413	473 aa	Predicted RBP	14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	EDDM3A	Q14507	147 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	ETV3L	Q6ZN32	361 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	CENPV	Q7Z7K6	275 aa	Predicted RBP	14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	ADGRG5	Q8IZF4	528 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	TRMT10A	Q8TBZ6	339 aa	Known RBP	14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	WWC2-AS2	Q96NR7	200 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	B9D2	Q9BPU9	175 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	APOL4	Q9BPW4	351 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	CHID1	Q9BWS9	393 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	CADM1	Q9BY67	442 aa	Known RBP	14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	TMEM133	Q9H2Q1	129 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	SLC25A19	Q9HC21	320 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	LINC00312	Q9Y6C7	94 aa		14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	HUWE1	Q7Z6Z7	4374 aa	Known RBP	14.57	□□□□□ -0.08
CIRBP-238	ENST00000592412	DUS4L	O95620	317 aa	Known RBP	14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	IGHA1	P01876	353 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	CALB2	P22676	271 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	ABCA11P	Q4W5N1	156 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	C16orf82	Q7Z2V1	217 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	ASB17	Q8WXJ9	295 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	SLAMF9	Q96A28	289 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	SNX22	Q96L94	193 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	CEP19	Q96LK0	163 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	CLEC7A	Q9BXN2	247 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	LIN7B	Q9HAP6	207 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	OR52A1	Q9UKL2	312 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	IKZF2	Q9UKS7	526 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	GTF2A1L	Q9UNN4	478 aa		14.56	□□□□□ -0.08
CIRBP-238	ENST00000592412	hADV38S2	A0JD32	116 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	DHRS7C	A6NNS2	312 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	LOC110117498-PIK3R3	F6TDL0	507 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	PSPN	O60542	156 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	CCL1	P22362	96 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	PRKACG	P22612	351 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	CD69	Q07108	199 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	UBE2V2	Q15819	145 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	BCL2L15	Q5TBC7	163 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	ZNF322	Q6U7Q0	402 aa	Predicted RBP	14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	BCDIN3D	Q7Z5W3	292 aa	Known RBP	14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	CHST6	Q9GZX3	395 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	MOB1A	Q9H8S9	216 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	TMEM14A	Q9Y6G1	99 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412		R4GMQ9	66 aa		14.55	□□□□□ -0.08
CIRBP-238	ENST00000592412	FAM230A	A0A1W2PPH8	454 aa		14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	E2F6	O75461	281 aa		14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	DNAJC8	O75937	253 aa	Predicted RBP	14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	INMT	O95050	263 aa		14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	T-ENOL	P0DO92	83 aa		14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	HTR1D	P28221	377 aa		14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	CXCR4	P61073	352 aa		14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	MRPL41	Q8IXM3	137 aa	Known RBP	14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	ARHGAP24	Q8N264	748 aa		14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	OR4X2	Q8NGF9	303 aa		14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	SLC25A33	Q9BSK2	321 aa		14.54	□□□□□ -0.08
CIRBP-238	ENST00000592412	TVP23B	Q9NYZ1	205 aa		14.54	□□□□□ -0.08

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms