RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 CELP19835 753 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 EPHA1P21709 976 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 PRDX2P32119 198 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 SPHARQ15513 63 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 KISS1Q15726 138 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 DGUOKQ16854 277 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 Q499Y3 187 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 RBM48Q5RL73 367 aaKnown RBP9.85□□□□□ -0.83
LIG3-213ENST00000590630 FIP1L1Q6UN15 594 aaKnown RBP9.85□□□□□ -0.83
LIG3-213ENST00000590630 SAXO1Q8IYX7 474 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 ZFP41Q8N8Y5 198 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 ZNRF1Q8ND25 227 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 C8orf46Q8TAG6 207 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 THRSPQ92748 146 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 UPRTQ96BW1 309 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 RHOFQ9HBH0 211 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 MAB21L2Q9Y586 359 aa9.85□□□□□ -0.83
LIG3-213ENST00000590630 PNMA8CA0A1B0GUJ8 204 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 ZNF879B4DU55 563 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 F8VVB4 439 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 F8VWA3 439 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 TFF1P04155 84 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 FGF12P61328 243 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 RPS11P62280 158 aaKnown RBP eCLIP9.84□□□□□ -0.83
LIG3-213ENST00000590630 PPP3R1P63098 170 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 IRF3Q14653 427 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 METTL11BQ5VVY1 283 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 ASPHD2Q6ICH7 369 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 PRSS48Q7RTY5 328 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 BATF2Q8N1L9 274 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 FGFRL1Q8N441 504 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 CD177Q8N6Q3 437 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 ZSCAN4Q8NAM6 433 aaPredicted RBP9.84□□□□□ -0.83
LIG3-213ENST00000590630 LY6G5BQ8NDX9 201 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 TMEM185AQ8NFB2 350 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 SGCDQ92629 289 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 EMG1Q92979 244 aaKnown RBP9.84□□□□□ -0.83
LIG3-213ENST00000590630 RFT1Q96AA3 541 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 SPACA5Q96QH8 159 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 DCTN5Q9BTE1 182 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 TMEM138Q9NPI0 162 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 TAS2R4Q9NYW5 299 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 CKLFQ9UBR5 152 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 OR14J1Q9UGF5 321 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 NUP50Q9UKX7 468 aa9.84□□□□□ -0.83
LIG3-213ENST00000590630 LSM2Q9Y333 95 aaKnown RBP9.84□□□□□ -0.83
LIG3-213ENST00000590630 TRBV23-1A0A0A0MS06 115 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 DENRO43583 198 aaKnown RBP9.83□□□□□ -0.84
LIG3-213ENST00000590630 SPRY1O43609 319 aaPredicted RBP9.83□□□□□ -0.84
LIG3-213ENST00000590630 TOX4O94842 621 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 KDM4BO94953 1096 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 ALDOBP05062 364 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 NDUFB7P17568 137 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 FSTP19883 344 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 BCL3P20749 454 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 MAPK3P27361 379 aaPredicted RBP9.83□□□□□ -0.84
LIG3-213ENST00000590630 NPBWR2P48146 333 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 CAPZA1P52907 286 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 ZP1P60852 638 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 GPR50Q13585 617 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 DOC2BQ14184 412 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 ZNF146Q15072 292 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 MED22Q15528 200 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 KLF17Q5JT82 389 aaPredicted RBP9.83□□□□□ -0.84
LIG3-213ENST00000590630 SPIN3Q5JUX0 258 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 CRIP3Q6Q6R5 217 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 FAM58AQ8N1B3 248 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 MS4A15Q8N5U1 240 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 KIR3DL3Q8N743 410 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 OR51A2Q8NGJ7 313 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 OR5D18Q8NGL1 313 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 OR13C5Q8NGS8 318 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 H1FXQ92522 213 aaKnown RBP9.83□□□□□ -0.84
LIG3-213ENST00000590630 WDFY2Q96P53 400 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 OR14A2Q96R54 314 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 OR5M11Q96RB7 305 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 FAM234AQ9H0X4 552 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 CNTD2Q9H8S5 307 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 SEBOXQ9HB31 216 aaPredicted RBP9.83□□□□□ -0.84
LIG3-213ENST00000590630 RBFOX1Q9NWB1 397 aaKnown RBP9.83□□□□□ -0.84
LIG3-213ENST00000590630 KPTNQ9Y664 436 aa9.83□□□□□ -0.84
LIG3-213ENST00000590630 TRBV5-7A0A0A0MS05 114 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 A0A0A6YYJ9 748 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 IGKV1-12A0A0C4DH73 117 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 TCF21O43680 179 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 ANGPTL7O43827 346 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 GPX5O75715 221 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 INMTO95050 263 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 IGKV1D-12P01611 117 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 CHRM2P08172 466 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 TMEM225BP0DP42 221 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 MMP9P14780 707 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 IGFBP3P17936 291 aaPredicted RBP9.82□□□□□ -0.84
LIG3-213ENST00000590630 EEF1B2P24534 225 aaKnown RBP9.82□□□□□ -0.84
LIG3-213ENST00000590630 FPR2P25090 351 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 BDKRB2P30411 391 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 CEBPDP49716 269 aaPredicted RBP9.82□□□□□ -0.84
LIG3-213ENST00000590630 RNF144BQ7Z419 303 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 CMTM4Q8IZR5 234 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 BPIFB2Q8N4F0 458 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms