RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 IL13RA2Q14627 380 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 MRPL41Q8IXM3 137 aaKnown RBP15.06■□□□□ 0
SMARCA4-215ENST00000590574 GFI1Q99684 422 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 ZNF391Q9UJN7 358 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 NPTNQ9Y639 398 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 GUCA2BQ16661 112 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 DYRK2Q92630 601 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 NTNG2Q96CW9 530 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 RSPO3Q9BXY4 272 aaPredicted RBP15.06■□□□□ 0
SMARCA4-215ENST00000590574 GCM1Q9NP62 436 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 FAM74A7A6NL05 159 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 IGKV3-11P04433 115 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 NAT1P18440 290 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 FAM74A3Q4VXF1 159 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 OR4A16Q8NH70 328 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 FER1L6-AS2Q96M78 137 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 CHST5Q9GZS9 411 aa15.06■□□□□ 0
SMARCA4-215ENST00000590574 A8MXE2 369 aa15.05■□□□□ 0
SMARCA4-215ENST00000590574 TERTO14746 1132 aaKnown RBP15.05■□□□□ 0
SMARCA4-215ENST00000590574 FAM157BP0CG42 384 aa15.05■□□□□ 0
SMARCA4-215ENST00000590574 VAX1Q5SQQ9 334 aa15.05■□□□□ 0
SMARCA4-215ENST00000590574 OR5C1Q8NGR4 320 aa15.05■□□□□ 0
SMARCA4-215ENST00000590574 APOBEC3DQ96AK3 386 aaPredicted RBP15.05■□□□□ 0
SMARCA4-215ENST00000590574 WDR13Q9H1Z4 485 aa15.05■□□□□ 0
SMARCA4-215ENST00000590574 DOCK6Q96HP0 2047 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 MT-ND4LP03901 98 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 PGA4P0DJD7 388 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 PGA3P0DJD8 388 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 CCL2P13500 99 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 KCNJ3P48549 501 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 SPATA46Q5T0L3 261 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 FAM24BQ8N5W8 94 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 RIMS4Q9H426 269 aaPredicted RBP15.05■□□□□ -0
SMARCA4-215ENST00000590574 HLA-HP01893 362 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 CD74P04233 296 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 CCL3P10147 92 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 EDDM3AQ14507 147 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 OR8G1Q15617 311 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 OR2C3Q8N628 320 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 OR2I1PQ8NGU4 316 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 TVP23CQ96ET8 276 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 SLC35B3Q9H1N7 401 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 SH2D1BO14796 132 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 PTGER4P35408 488 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 HOXA1P49639 335 aaPredicted RBP15.05■□□□□ -0
SMARCA4-215ENST00000590574 PRDX4Q13162 271 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 ZNF385AQ96PM9 386 aaKnown RBP15.05■□□□□ -0
SMARCA4-215ENST00000590574 LIN7CQ9NUP9 197 aaKnown RBP15.05■□□□□ -0
SMARCA4-215ENST00000590574 POLDIP2Q9Y2S7 368 aa15.05■□□□□ -0
SMARCA4-215ENST00000590574 ABCD4O14678 606 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 MPGP29372 298 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 H2BFWTQ7Z2G1 175 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 RAB39BQ96DA2 213 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 EDEM2Q9BV94 578 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 GPR132Q9UNW8 380 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 IGHV5-10-1A0A0J9YXX1 117 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 SEC16AO15027 2179 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 FGF2P09038 288 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 RD3LP0DJH9 198 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 PIGYQ3MUY2 71 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 ZNF429Q86V71 674 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 IFT22Q9H7X7 185 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 LHFPL6Q9Y693 200 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 ZNF727A8MUV8 499 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 IGHMP01871 453 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 TMEM267Q0VDI3 215 aaPredicted RBP15.04■□□□□ -0
SMARCA4-215ENST00000590574 NECAP1Q8NC96 275 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 C10orf35Q96D05 121 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 RAB9BQ9NP90 201 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 AMDHD2Q9Y303 409 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 POMT1Q9Y6A1 747 aa15.04■□□□□ -0
SMARCA4-215ENST00000590574 HTD2P86397 168 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 AWAT1Q58HT5 328 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 LYZL2Q7Z4W2 148 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 C15orf54Q8N8G6 183 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 CLDN23Q96B33 292 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 GPR37O15354 613 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 HOXD4P09016 255 aaPredicted RBP15.03■□□□□ -0
SMARCA4-215ENST00000590574 C4orf17Q53FE4 359 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 RAB33BQ9H082 229 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 SLC26A1Q9H2B4 701 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 RAC3P60763 192 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 POLR2GP62487 172 aaKnown RBP eCLIP15.03■□□□□ -0
SMARCA4-215ENST00000590574 VHLLQ6RSH7 139 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 LIAT1Q6ZQX7 453 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 VASH2Q86V25 355 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 WNT2BQ93097 391 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 STARD10Q9Y365 291 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 A0A1W2PPH5 198 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 NFYBP25208 207 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 SRD5A2P31213 254 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 NAAAQ02083 359 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 UBALD1Q8TB05 177 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 LHX4Q969G2 390 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 ISOC2Q96AB3 205 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 WNT16Q9UBV4 365 aa15.03■□□□□ -0
SMARCA4-215ENST00000590574 BTBD17A6NE02 478 aa15.02■□□□□ -0
SMARCA4-215ENST00000590574 CTRB1P17538 263 aa15.02■□□□□ -0
SMARCA4-215ENST00000590574 CTRB2Q6GPI1 263 aa15.02■□□□□ -0
SMARCA4-215ENST00000590574 PUSL1Q8N0Z8 303 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms