RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ZNF649Q9BS31 505 aa9.93□□□□□ -0.82
TPM4-212ENST00000590180 ZCCHC4Q9H5U6 513 aa9.93□□□□□ -0.82
TPM4-212ENST00000590180 NEK6Q9HC98 313 aa9.93□□□□□ -0.82
TPM4-212ENST00000590180 HES4Q9HCC6 221 aa9.93□□□□□ -0.82
TPM4-212ENST00000590180 C19orf12Q9NSK7 152 aa9.93□□□□□ -0.82
TPM4-212ENST00000590180 CHCHD3Q9NX63 227 aaKnown RBP9.93□□□□□ -0.82
TPM4-212ENST00000590180 TRBV23-1A0A0A0MS06 115 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 A0A0U1RQK1 487 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 A0A1W2PPH5 198 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 TMEM212A6NML5 194 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 CLDN34H7C241 214 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 M0R1W7 72 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 SPRY1O43609 319 aaPredicted RBP9.92□□□□□ -0.82
TPM4-212ENST00000590180 ZFPL1O95159 310 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 CRYBA1P05813 215 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 RNASE1P07998 156 aaKnown RBP9.92□□□□□ -0.82
TPM4-212ENST00000590180 HKR1P10072 659 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 CALCBP10092 127 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 MYL12AP19105 171 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 ETV1P50549 477 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 ADARB1P78563 741 aaKnown RBP9.92□□□□□ -0.82
TPM4-212ENST00000590180 GUCA2AQ02747 115 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 COL10A1Q03692 680 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 FOXL1Q12952 345 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 KLRD1Q13241 179 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 TMEM200BQ69YZ2 307 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 LHFPL2Q6ZUX7 228 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 ASCC1Q8N9N2 400 aaKnown RBP9.92□□□□□ -0.82
TPM4-212ENST00000590180 OR5D14Q8NGL3 314 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 OR13C9Q8NGT0 318 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 TBC1D15Q8TC07 691 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 TSEN15Q8WW01 171 aaKnown RBP9.92□□□□□ -0.82
TPM4-212ENST00000590180 EMG1Q92979 244 aaKnown RBP9.92□□□□□ -0.82
TPM4-212ENST00000590180 SPSB1Q96BD6 273 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 SPACA5Q96QH8 159 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 PDCD1LG2Q9BQ51 273 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 PRDM13Q9H4Q3 707 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 DHDHQ9UQ10 334 aa9.92□□□□□ -0.82
TPM4-212ENST00000590180 CAB39Q9Y376 341 aaPredicted RBP9.92□□□□□ -0.82
TPM4-212ENST00000590180 RNASEK-C17orf49H0YIS7 233 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 K7N7A8 449 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 NPFFO15130 113 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 ANGPTL7O43827 346 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 TK1P04183 234 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 MELTFP08582 738 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 HCKP08631 526 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 PIPP12273 146 aaPredicted RBP9.91□□□□□ -0.82
TPM4-212ENST00000590180 BCL3P20749 454 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 CFPP27918 469 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 DUSP1P28562 367 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 CAPGP40121 348 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 NPBWR2P48146 333 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 COMPP49747 757 aaPredicted RBP9.91□□□□□ -0.82
TPM4-212ENST00000590180 SNU13P55769 128 aaKnown RBP9.91□□□□□ -0.82
TPM4-212ENST00000590180 PDZK1IP1Q13113 114 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 IL18R1Q13478 541 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 MED21Q13503 144 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 AWAT1Q58HT5 328 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 OGFRL1Q5TC84 451 aaPredicted RBP9.91□□□□□ -0.82
TPM4-212ENST00000590180 OR2G6Q5TZ20 316 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 RPL22L1Q6P5R6 122 aaKnown RBP9.91□□□□□ -0.82
TPM4-212ENST00000590180 FIP1L1Q6UN15 594 aaKnown RBP9.91□□□□□ -0.82
TPM4-212ENST00000590180 SERPINA12Q8IW75 414 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 Q8IYB0 196 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 FAM58AQ8N1B3 248 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 PNKDQ8N490 385 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 PIP4P2Q8N4L2 257 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 OR5D13Q8NGL4 314 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 HAVCR2Q8TDQ0 301 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 TAF15Q92804 592 aaKnown RBP eCLIP9.91□□□□□ -0.82
TPM4-212ENST00000590180 GGHQ92820 318 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 TMEM80Q96HE8 168 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 FAM234AQ9H0X4 552 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 VCXQ9H320 206 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 DCLRE1BQ9H816 532 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 METTL8Q9H825 291 aaKnown RBP9.91□□□□□ -0.82
TPM4-212ENST00000590180 BABAM2Q9NXR7 383 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 GLS2Q9UI32 602 aa9.91□□□□□ -0.82
TPM4-212ENST00000590180 EXOSC1Q9Y3B2 195 aaKnown RBP9.91□□□□□ -0.82
TPM4-212ENST00000590180 SF3B6Q9Y3B4 125 aaKnown RBP9.91□□□□□ -0.82
TPM4-212ENST00000590180 hCG_1809904A0A1W2PP81 198 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 A0A1W2PPE2 198 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 A0A1W2PR64 198 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 A0A1W2PRV1 198 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 MEIOCA2RUB1 952 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 MAGEB3O15480 346 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 HAND1O96004 215 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 PAHP00439 452 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 TMEM225BP0DP42 221 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 PRKACAP17612 351 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 SOX2P48431 317 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 UBE2E1P51965 193 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 EDDM3BP56851 147 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 NCR3LG1Q68D85 454 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 METAP1DQ6UB28 335 aaPredicted RBP9.9□□□□□ -0.82
TPM4-212ENST00000590180 GDPD3Q7L5L3 318 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 RNF144BQ7Z419 303 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 SATL1Q86VE3 508 aa9.9□□□□□ -0.82
TPM4-212ENST00000590180 C8orf59Q8N0T1 100 aaPredicted RBP9.9□□□□□ -0.82
TPM4-212ENST00000590180 ZSCAN4Q8NAM6 433 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms