RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 IL36RNQ9UBH0 155 aa14.74□□□□□ -0.05
CCDC43-204ENST00000588687 IKZF2Q9UKS7 526 aa14.74□□□□□ -0.05
CCDC43-204ENST00000588687 HILPDAQ9Y5L2 63 aa14.74□□□□□ -0.05
CCDC43-204ENST00000588687 TMEM14AQ9Y6G1 99 aa14.74□□□□□ -0.05
CCDC43-204ENST00000588687 R4GMQ9 66 aa14.74□□□□□ -0.05
CCDC43-204ENST00000588687 PRKYO43930 277 aa14.73□□□□□ -0.05
CCDC43-204ENST00000588687 T-ENOLP0DO92 83 aa14.73□□□□□ -0.05
CCDC43-204ENST00000588687 AZGP1P25311 298 aaKnown RBP14.73□□□□□ -0.05
CCDC43-204ENST00000588687 EDDM3BP56851 147 aa14.73□□□□□ -0.05
CCDC43-204ENST00000588687 KRTAP10-11P60412 298 aa14.73□□□□□ -0.05
CCDC43-204ENST00000588687 MEF2CQ06413 473 aaPredicted RBP14.73□□□□□ -0.05
CCDC43-204ENST00000588687 BCL2L15Q5TBC7 163 aa14.73□□□□□ -0.05
CCDC43-204ENST00000588687 ZNF322Q6U7Q0 402 aaPredicted RBP14.73□□□□□ -0.05
CCDC43-204ENST00000588687 BCDIN3DQ7Z5W3 292 aaKnown RBP14.73□□□□□ -0.05
CCDC43-204ENST00000588687 OR5AU1Q8NGC0 362 aa14.73□□□□□ -0.05
CCDC43-204ENST00000588687 CNN2Q99439 309 aaKnown RBP14.73□□□□□ -0.05
CCDC43-204ENST00000588687 APOL4Q9BPW4 351 aa14.73□□□□□ -0.05
CCDC43-204ENST00000588687 CADM1Q9BY67 442 aaKnown RBP14.73□□□□□ -0.05
CCDC43-204ENST00000588687 ADGRL4Q9HBW9 690 aa14.73□□□□□ -0.05
CCDC43-204ENST00000588687 MRM2Q9UI43 246 aaKnown RBP14.73□□□□□ -0.05
CCDC43-204ENST00000588687 OR52A1Q9UKL2 312 aa14.73□□□□□ -0.05
CCDC43-204ENST00000588687 LINC00312Q9Y6C7 94 aa14.73□□□□□ -0.05
CCDC43-204ENST00000588687 PEX14O75381 377 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 MMP23AO75900 390 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 ALDOBP05062 364 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 CHRM2P08172 466 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 ANXA8P13928 327 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 OR12D2P58182 307 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 CXCR4P61073 352 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 SLC34A1Q06495 639 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 DYNC1I2Q13409 638 aaKnown RBP14.72□□□□□ -0.05
CCDC43-204ENST00000588687 UBE2V2Q15819 145 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 SNAPC1Q16533 368 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 GDPD3Q7L5L3 318 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 TPRX1Q8N7U7 411 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 OR52N4Q8NGI2 321 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 TRMT10AQ8TBZ6 339 aaKnown RBP14.72□□□□□ -0.05
CCDC43-204ENST00000588687 CEP19Q96LK0 163 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 ZNF556Q9HAH1 456 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 TVP23BQ9NYZ1 205 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 SESN1Q9Y6P5 492 aa14.72□□□□□ -0.05
CCDC43-204ENST00000588687 WI2-2373I1.2A0A1W2PRP0 233 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 M0R129 80 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 PSPNO60542 156 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 IGHA1P01876 353 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 GYS2P54840 703 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 ESRRGP62508 458 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 EFNB1P98172 346 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 EGFEM1PQ0D2K5 195 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 C10orf99Q6UWK7 81 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 SSX6Q7RTT6 188 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 SLAMF9Q96A28 289 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 NSL1Q96IY1 281 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 SNX22Q96L94 193 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 TMEM133Q9H2Q1 129 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 SEBOXQ9HB31 216 aaPredicted RBP14.71□□□□□ -0.05
CCDC43-204ENST00000588687 GTF2A1LQ9UNN4 478 aa14.71□□□□□ -0.05
CCDC43-204ENST00000588687 AQP12BA6NM10 295 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 AMY1AP04745 511 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 AMY2AP04746 511 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 PF4V1P10720 104 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 CRISP1P54107 249 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 SLC35A2P78381 396 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 ZNF91Q05481 1191 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 EDDM3AQ14507 147 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 ARSJQ5FYB0 599 aaPredicted RBP14.7□□□□□ -0.06
CCDC43-204ENST00000588687 AADACL4Q5VUY2 407 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 FAHD1Q6P587 224 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 BAIAP2L2Q6UXY1 529 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 C16orf82Q7Z2V1 217 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 AQP12AQ8IXF9 295 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 SLC35F2Q8IXU6 374 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 ZNF676Q8N7Q3 588 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 MYDGFQ969H8 173 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 RCC1LQ96I51 464 aaKnown RBP14.7□□□□□ -0.06
CCDC43-204ENST00000588687 LRGUKQ96M69 825 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 CLEC7AQ9BXN2 247 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 LIN7BQ9HAP6 207 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 INPP5EQ9NRR6 644 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 SNX5Q9Y5X3 404 aa14.7□□□□□ -0.06
CCDC43-204ENST00000588687 FAM230AA0A1W2PPH8 454 aa14.69□□□□□ -0.06
CCDC43-204ENST00000588687 hADV38S2A0JD32 116 aa14.69□□□□□ -0.06
CCDC43-204ENST00000588687 GNGT2O14610 69 aa14.69□□□□□ -0.06
CCDC43-204ENST00000588687 DNAJC8O75937 253 aaPredicted RBP14.69□□□□□ -0.06
CCDC43-204ENST00000588687 CD24P25063 80 aa14.69□□□□□ -0.06
CCDC43-204ENST00000588687 GNGT1P63211 74 aa14.69□□□□□ -0.06
CCDC43-204ENST00000588687 CCDC121Q6ZUS5 278 aa14.69□□□□□ -0.06
CCDC43-204ENST00000588687 MEPCEQ7L2J0 689 aaKnown RBP14.69□□□□□ -0.06
CCDC43-204ENST00000588687 NDNFQ8TB73 568 aa14.69□□□□□ -0.06
CCDC43-204ENST00000588687 MNTQ99583 582 aa14.69□□□□□ -0.06
CCDC43-204ENST00000588687 CHST5Q9GZS9 411 aa14.69□□□□□ -0.06
CCDC43-204ENST00000588687 CHST6Q9GZX3 395 aa14.69□□□□□ -0.06
CCDC43-204ENST00000588687 CLN6Q9NWW5 311 aa14.69□□□□□ -0.06
CCDC43-204ENST00000588687 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.69□□□□□ -0.06
CCDC43-204ENST00000588687 TSSC4Q9Y5U2 329 aaPredicted RBP14.69□□□□□ -0.06
CCDC43-204ENST00000588687 HAND1O96004 215 aa14.68□□□□□ -0.06
CCDC43-204ENST00000588687 IGLV1-47P01700 117 aa14.68□□□□□ -0.06
CCDC43-204ENST00000588687 CALB2P22676 271 aa14.68□□□□□ -0.06
CCDC43-204ENST00000588687 PTGES3Q15185 160 aaKnown RBP14.68□□□□□ -0.06
CCDC43-204ENST00000588687 ETV3LQ6ZN32 361 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms