RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 RHOFQ9HBH0 211 aa13.25□□□□□ -0.29
RETREG3-206ENST00000588423 TRBV23-1A0A0A0MS06 115 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 CD2P06729 351 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 SFTPBP07988 381 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 NDUFB7P17568 137 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 HSPA13P48723 471 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 ARF6P62330 175 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 C6orf141Q5SZD1 244 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 DMKNQ6E0U4 476 aaPredicted RBP13.24□□□□□ -0.29
RETREG3-206ENST00000588423 ZNF529Q6P280 563 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 C1orf122Q6ZSJ8 110 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 SAXO1Q8IYX7 474 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 CMTM4Q8IZR5 234 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 TMEM185AQ8NFB2 350 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 H1FXQ92522 213 aaKnown RBP13.24□□□□□ -0.29
RETREG3-206ENST00000588423 CPNE2Q96FN4 548 aaPredicted RBP13.24□□□□□ -0.29
RETREG3-206ENST00000588423 ANKRD60Q9BZ19 345 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 ZNF281Q9Y2X9 895 aa13.24□□□□□ -0.29
RETREG3-206ENST00000588423 SIRT4Q9Y6E7 314 aaPredicted RBP13.24□□□□□ -0.29
RETREG3-206ENST00000588423 MYL12BO14950 172 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 LALBAP00709 142 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 CD1AP06126 327 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 CHRM2P08172 466 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 MYF6P23409 242 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 C21orf33P30042 268 aaPredicted RBP13.23□□□□□ -0.29
RETREG3-206ENST00000588423 VHLP40337 213 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 POU3F4P49335 361 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 WNT4P56705 351 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 CRIP3Q6Q6R5 217 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 METAP1DQ6UB28 335 aaPredicted RBP13.23□□□□□ -0.29
RETREG3-206ENST00000588423 FIP1L1Q6UN15 594 aaKnown RBP13.23□□□□□ -0.29
RETREG3-206ENST00000588423 PHC2Q8IXK0 858 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 ZSCAN4Q8NAM6 433 aaPredicted RBP13.23□□□□□ -0.29
RETREG3-206ENST00000588423 C22orf15Q8WYQ4 148 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 SCN3BQ9NY72 215 aa13.23□□□□□ -0.29
RETREG3-206ENST00000588423 DOCK11Q5JSL3 2073 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 TRBV5-5A0A0J9YX44 114 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 CENPVL3A0A0U1RRI6 287 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 F8VVB4 439 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 F8VWA3 439 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 TRIM77I1YAP6 450 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 M0R1W7 72 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 KDM4BO94953 1096 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 TK1P04183 234 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 CDK1P06493 297 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 HCKP08631 526 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 RAB3AP20336 220 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 CEBPDP49716 269 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-206ENST00000588423 CAPZA1P52907 286 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 SRSF2Q01130 221 aaKnown RBP13.22□□□□□ -0.29
RETREG3-206ENST00000588423 BDH1Q02338 343 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 ZNF146Q15072 292 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 KISS1Q15726 138 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 YIF1BQ5BJH7 314 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 SPIN3Q5JUX0 258 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 RBMS3Q6XE24 437 aaKnown RBP13.22□□□□□ -0.29
RETREG3-206ENST00000588423 BCL6BQ8N143 479 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-206ENST00000588423 FAM58AQ8N1B3 248 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 BATF2Q8N1L9 274 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 NANOGP1Q8N7R0 232 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 TBC1D15Q8TC07 691 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 GHSRQ92847 366 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 EMG1Q92979 244 aaKnown RBP13.22□□□□□ -0.29
RETREG3-206ENST00000588423 MYDGFQ969H8 173 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 TMEM106AQ96A25 262 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 PGLYRP3Q96LB9 341 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 C19orf24Q9BVV8 132 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 CDCA4Q9BXL8 241 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 UNKLQ9H9P5 680 aaKnown RBP13.22□□□□□ -0.29
RETREG3-206ENST00000588423 ONECUT1Q9UBC0 465 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 OR14J1Q9UGF5 321 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 ERGIC3Q9Y282 383 aa13.22□□□□□ -0.29
RETREG3-206ENST00000588423 IGHV3OR16-10A0A075B7F0 116 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 K7N7A8 449 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 MAGEB3O15480 346 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 SPRY1O43609 319 aaPredicted RBP13.21□□□□□ -0.29
RETREG3-206ENST00000588423 ALDOBP05062 364 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 BCL3P20749 454 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 NPBWR2P48146 333 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 SOX2P48431 317 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 ZP1P60852 638 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 COL10A1Q03692 680 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 ACSM1Q08AH1 577 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 ASPHD2Q6ICH7 369 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 IZUMO2Q6UXV1 221 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 VMO1Q7Z5L0 202 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 Q8N7P7 452 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 SIGLECL1Q8N7X8 197 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 ZDHHC22Q8N966 263 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 RFT1Q96AA3 541 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 SPACA5Q96QH8 159 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 PRDM13Q9H4Q3 707 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 ZMAT3Q9HA38 289 aaKnown RBP13.21□□□□□ -0.29
RETREG3-206ENST00000588423 ELL3Q9HB65 397 aaPredicted RBP13.21□□□□□ -0.29
RETREG3-206ENST00000588423 HMG20AQ9NP66 347 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 RBFOX1Q9NWB1 397 aaKnown RBP13.21□□□□□ -0.29
RETREG3-206ENST00000588423 GLS2Q9UI32 602 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 PCDHGB5Q9Y5G0 923 aa13.21□□□□□ -0.29
RETREG3-206ENST00000588423 IGHV1-69DA0A0B4J2H0 117 aa13.2□□□□□ -0.3
RETREG3-206ENST00000588423 IGKV1-12A0A0C4DH73 117 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms