RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 FAM89BQ8N5H3 189 aa9.54□□□□□ -0.88
VMP1-207ENST00000588131 OR10R2Q8NGX6 335 aa9.54□□□□□ -0.88
VMP1-207ENST00000588131 LRRC29Q8WV35 223 aa9.54□□□□□ -0.88
VMP1-207ENST00000588131 EMG1Q92979 244 aaKnown RBP9.54□□□□□ -0.88
VMP1-207ENST00000588131 TRAF4Q9BUZ4 470 aaPredicted RBP9.54□□□□□ -0.88
VMP1-207ENST00000588131 MS4A5Q9H3V2 200 aa9.54□□□□□ -0.88
VMP1-207ENST00000588131 CXorf56Q9H5V9 222 aa9.54□□□□□ -0.88
VMP1-207ENST00000588131 FN3KRPQ9HA64 309 aa9.54□□□□□ -0.88
VMP1-207ENST00000588131 GCM1Q9NP62 436 aa9.54□□□□□ -0.88
VMP1-207ENST00000588131 DIABLOQ9NR28 239 aa9.54□□□□□ -0.88
VMP1-207ENST00000588131 TREM2Q9NZC2 230 aa9.54□□□□□ -0.88
VMP1-207ENST00000588131 ST3GAL6Q9Y274 331 aa9.54□□□□□ -0.88
VMP1-207ENST00000588131 CHD3Q12873 2000 aaKnown RBP9.54□□□□□ -0.88
VMP1-207ENST00000588131 UBR5O95071 2799 aaPredicted RBP9.54□□□□□ -0.88
VMP1-207ENST00000588131 PLCE1Q9P212 2302 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 DOPEY1Q5JWR5 2465 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 NAV2Q8IVL1 2488 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 GEMIN2O14893 280 aaKnown RBP9.53□□□□□ -0.88
VMP1-207ENST00000588131 TPD52L2O43399 206 aaKnown RBP9.53□□□□□ -0.88
VMP1-207ENST00000588131 CHRM2P08172 466 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 ACAA1P09110 424 aaPredicted RBP9.53□□□□□ -0.88
VMP1-207ENST00000588131 COX6B1P14854 86 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 PTBP1P26599 531 aaKnown RBP eCLIP9.53□□□□□ -0.88
VMP1-207ENST00000588131 MNDAP41218 407 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 PPOXP50336 477 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 TMEM50BP56557 158 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 TLE4Q04727 773 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 TESK1Q15569 626 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 BAK1Q16611 211 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 RNASE12Q5GAN4 147 aaKnown RBP9.53□□□□□ -0.88
VMP1-207ENST00000588131 PLAC9Q5JTB6 97 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 FAM209AQ5JX71 171 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 AGAP6Q5VW22 663 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 SIGIRRQ6IA17 410 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 BAIAP2L2Q6UXY1 529 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 DTX2Q86UW9 622 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 FAM58AQ8N1B3 248 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 CHST4Q8NCG5 386 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 OR56B1Q8NGI3 324 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 OR10Z1Q8NGY1 313 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 BORCS5Q969J3 196 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 PHF21AQ96BD5 680 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 SEH1LQ96EE3 360 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 MRPS24Q96EL2 167 aaKnown RBP9.53□□□□□ -0.88
VMP1-207ENST00000588131 WDR13Q9H1Z4 485 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 ZMAT3Q9HA38 289 aaKnown RBP9.53□□□□□ -0.88
VMP1-207ENST00000588131 HES4Q9HCC6 221 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 PCDHB16Q9NRJ7 776 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 DCAF16Q9NXF7 216 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 ELF5Q9UKW6 265 aaPredicted RBP9.53□□□□□ -0.88
VMP1-207ENST00000588131 CACNG2Q9Y698 323 aa9.53□□□□□ -0.88
VMP1-207ENST00000588131 SPTBN1Q01082 2364 aaKnown RBP9.52□□□□□ -0.88
VMP1-207ENST00000588131 A0A0A6YYH2 397 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 A6NJ64 397 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.52□□□□□ -0.89
VMP1-207ENST00000588131 SCGNO76038 276 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 NXPH2O95156 264 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 CYB5R3P00387 301 aaPredicted RBP9.52□□□□□ -0.89
VMP1-207ENST00000588131 HPXP02790 462 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 GNB3P16520 340 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 TNFRSF1AP19438 455 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 GLRA1P23415 457 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 COL8A1P27658 744 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 DUSP1P28562 367 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 BLVRBP30043 206 aaPredicted RBP9.52□□□□□ -0.89
VMP1-207ENST00000588131 DGCR2P98153 550 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 IFITM3Q01628 133 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 FAM189A2Q15884 450 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 PCGF3Q3KNV8 242 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 ZNF260Q3ZCT1 412 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 NHLRC3Q5JS37 347 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 OLFML2AQ68BL7 652 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 RAB12Q6IQ22 244 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 Q8IYB0 196 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 ADGRG4Q8IZF6 3080 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 GCSAMQ8N6F7 178 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 GDPD1Q8N9F7 314 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 BOLLQ8N9W6 283 aaKnown RBP9.52□□□□□ -0.89
VMP1-207ENST00000588131 Q8TCH9 128 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 RAB3CQ96E17 227 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 ARHGAP5-AS1Q96IT6 56 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 VRK1Q99986 396 aaPredicted RBP9.52□□□□□ -0.89
VMP1-207ENST00000588131 NUDT16L1Q9BRJ7 211 aaKnown RBP9.52□□□□□ -0.89
VMP1-207ENST00000588131 EGLN1Q9GZT9 426 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 AUNIPQ9H7T9 357 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 SAP30LQ9HAJ7 183 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 RHOFQ9HBH0 211 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 DECR2Q9NUI1 292 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 FAIMQ9NVQ4 179 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 LAMP3Q9UQV4 416 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 KCNK7Q9Y2U2 307 aa9.52□□□□□ -0.89
VMP1-207ENST00000588131 HELZ2Q9BYK8 2649 aaKnown RBP9.51□□□□□ -0.89
VMP1-207ENST00000588131 MEIOCA2RUB1 952 aa9.51□□□□□ -0.89
VMP1-207ENST00000588131 TMEM235A6NFC5 223 aa9.51□□□□□ -0.89
VMP1-207ENST00000588131 SRRM5B3KS81 715 aa9.51□□□□□ -0.89
VMP1-207ENST00000588131 MFNGO00587 321 aa9.51□□□□□ -0.89
VMP1-207ENST00000588131 CTDSPLO15194 276 aa9.51□□□□□ -0.89
VMP1-207ENST00000588131 LHBP01229 141 aa9.51□□□□□ -0.89
VMP1-207ENST00000588131 TFF1P04155 84 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms