RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 NXNL2Q5VZ03 156 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 ZNF626Q68DY1 528 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 LHFPL4Q7Z7J7 247 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 C11orf44Q8N8P7 122 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 CCDC54Q8NEL0 328 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 WIPF2Q8TF74 440 aaPredicted RBP12.12□□□□□ -0.47
VAPA-209ENST00000585042 NKX3-1Q99801 234 aaPredicted RBP12.12□□□□□ -0.47
VAPA-209ENST00000585042 CIB1Q99828 191 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 APOL4Q9BPW4 351 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 C9orf16Q9BUW7 83 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 WNT10AQ9GZT5 417 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 GPR173Q9NS66 373 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 CLN6Q9NWW5 311 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 OR14J1Q9UGF5 321 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 SLC7A11Q9UPY5 501 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 SLC22A13Q9Y226 551 aa12.12□□□□□ -0.47
VAPA-209ENST00000585042 ZAR1LA6NP61 321 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 ZNF670-ZNF695F2Z2N8 137 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 ZNF737O75373 536 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 ALDOBP05062 364 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 ARG1P05089 322 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 IGHV1-8P0DP01 117 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 CCL1P22362 96 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 PAX6P26367 422 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 CEBPDP49716 269 aaPredicted RBP12.11□□□□□ -0.47
VAPA-209ENST00000585042 OR12D2P58182 307 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 COL10A1Q03692 680 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 MINOS1Q5TGZ0 78 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 CCBE1Q6UXH8 406 aaPredicted RBP12.11□□□□□ -0.47
VAPA-209ENST00000585042 Q6ZPA2 131 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 GDPD3Q7L5L3 318 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 SLC35F2Q8IXU6 374 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 SNX22Q96L94 193 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 RIBC2Q9H4K1 309 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 GTF2A1LQ9UNN4 478 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 MINOS1-NBL1R4GNA1 71 aa12.11□□□□□ -0.47
VAPA-209ENST00000585042 PIN1P1O15428 100 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 PRKYO43930 277 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 BAG2O95816 211 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 AZGP1P25311 298 aaKnown RBP12.1□□□□□ -0.47
VAPA-209ENST00000585042 ALDH3A2P51648 485 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 FUT6P51993 359 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 CDC42P60953 191 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 GABPB1Q06547 395 aaPredicted RBP12.1□□□□□ -0.47
VAPA-209ENST00000585042 SSX2Q16385 188 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 AADACL4Q5VUY2 407 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 ZNF782Q6ZMW2 699 aaPredicted RBP12.1□□□□□ -0.47
VAPA-209ENST00000585042 ANGPTL5Q86XS5 388 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 GID4Q8IVV7 300 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 ENTHD1Q8IYW4 607 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 OR8H2Q8N162 312 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 DYNAPQ8N1N2 210 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 TCEANCQ8N8B7 351 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 ASCC1Q8N9N2 400 aaKnown RBP12.1□□□□□ -0.47
VAPA-209ENST00000585042 TMEM163Q8TC26 289 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 C10orf35Q96D05 121 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 CEP19Q96LK0 163 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 GABARAPL3Q9BY60 117 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 ADGRL4Q9HBW9 690 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 NECAP2Q9NVZ3 263 aa12.1□□□□□ -0.47
VAPA-209ENST00000585042 hADV38S2A0JD32 116 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 PEX14O75381 377 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 SERPINA3P01011 423 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 ALPLP05186 524 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 CD28P10747 220 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 RAB13P51153 203 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 LOXL3P58215 753 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 ZSCAN26Q16670 478 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 NSUN5P1Q3KNT7 163 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 C12orf73Q69YU5 71 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 ZBTB49Q6ZSB9 765 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 Q8IYB0 196 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 PQLC1Q8N2U9 271 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 WFDC9Q8NEX5 89 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 OR8J1Q8NGP2 316 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 EME1Q96AY2 570 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 ZNF714Q96N38 554 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 MMP28Q9H239 520 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 IMPAD1Q9NX62 359 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 MTCH1Q9NZJ7 389 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 MRM2Q9UI43 246 aaKnown RBP12.09□□□□□ -0.47
VAPA-209ENST00000585042 LINC00312Q9Y6C7 94 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 NOTCH3Q9UM47 2321 aa12.09□□□□□ -0.47
VAPA-209ENST00000585042 FAM90A22PA8MWA6 464 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 EI24O14681 340 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 GATBO75879 557 aaKnown RBP12.08□□□□□ -0.48
VAPA-209ENST00000585042 ALX3O95076 343 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 KRT8P05787 483 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 PIPP12273 146 aaPredicted RBP12.08□□□□□ -0.48
VAPA-209ENST00000585042 PEX2P28328 305 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 EPHA2P29317 976 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 EDDM3BP56851 147 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 OXLD1Q5BKU9 147 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 C16orf82Q7Z2V1 217 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 EGFL6Q8IUX8 553 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 CBR4Q8N4T8 237 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 TRUB1Q8WWH5 349 aaKnown RBP12.08□□□□□ -0.48
VAPA-209ENST00000585042 RFKQ969G6 155 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 R3HDM4Q96D70 268 aa12.08□□□□□ -0.48
VAPA-209ENST00000585042 IL4I1Q96RQ9 567 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms