RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	TTC23	Q5W5X9	447 aa		10.91	□□□□□ -0.66
SREBF1-223	ENST00000584760		Q6YL49	198 aa		10.91	□□□□□ -0.66
SREBF1-223	ENST00000584760	C1orf122	Q6ZSJ8	110 aa		10.91	□□□□□ -0.66
SREBF1-223	ENST00000584760	PDZD9	Q8IXQ8	264 aa		10.91	□□□□□ -0.66
SREBF1-223	ENST00000584760	ZNF676	Q8N7Q3	588 aa		10.91	□□□□□ -0.66
SREBF1-223	ENST00000584760	OR13C3	Q8NGS6	347 aa		10.91	□□□□□ -0.66
SREBF1-223	ENST00000584760	TNFRSF14	Q92956	283 aa		10.91	□□□□□ -0.66
SREBF1-223	ENST00000584760	OPALIN	Q96PE5	141 aa		10.91	□□□□□ -0.66
SREBF1-223	ENST00000584760	NOX4	Q9NPH5	578 aa		10.91	□□□□□ -0.66
SREBF1-223	ENST00000584760	OR14J1	Q9UGF5	321 aa		10.91	□□□□□ -0.66
SREBF1-223	ENST00000584760		A0A0U1RQK1	487 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	ZNF737	O75373	536 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	MT-ND2	P03891	347 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	MELTF	P08582	738 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	CCDC159	P0C7I6	412 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	PRKACB	P22694	351 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	DCK	P27707	260 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	CAPZA1	P52907	286 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	GUCA2A	Q02747	115 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	KLRD1	Q13241	179 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	IL18R1	Q13478	541 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	XAF1	Q6GPH4	301 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	CRIP3	Q6Q6R5	217 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	LHFPL2	Q6ZUX7	228 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	DHRSX	Q8N5I4	330 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	SETD9	Q8NE22	299 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	RPS4Y2	Q8TD47	263 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	HAVCR2	Q8TDQ0	301 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	RGP1	Q92546	391 aa	Predicted RBP	10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	ZDHHC16	Q969W1	377 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	PDCD1LG2	Q9BQ51	273 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	FAM234A	Q9H0X4	552 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	METTL8	Q9H825	291 aa	Known RBP	10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	IL36RN	Q9UBH0	155 aa		10.9	□□□□□ -0.66
SREBF1-223	ENST00000584760	TRBV2	A0A0J9YWF9	115 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	IRGM	A1A4Y4	181 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760		K7N7A8	449 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	TK1	P04183	234 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	RPSA	P08865	295 aa	Known RBP	10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	GNAO1	P09471	354 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	POU3F4	P49335	361 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	ETV1	P50549	477 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	GTF2A1	P52655	376 aa	Predicted RBP	10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	GBX2	P52951	348 aa	Predicted RBP	10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	ATP1B3	P54709	279 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	MTCP1	P56278	107 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	RPL31	P62899	125 aa	Known RBP	10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	COL10A1	Q03692	680 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR2G6	Q5TZ20	316 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	NCR3LG1	Q68D85	454 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	HCP5	Q6MZN7	132 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	RNF144B	Q7Z419	303 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	LDLRAD3	Q86YD5	345 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760		Q8IYB0	196 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	FAM185A	Q8N0U4	392 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	PARP16	Q8N5Y8	322 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	TMEM86B	Q8N661	226 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR13C9	Q8NGT0	318 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	OR5AK2	Q8NH90	309 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	TAF15	Q92804	592 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	COMMD4	Q9H0A8	199 aa		10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	RBFOX1	Q9NWB1	397 aa	Known RBP	10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	DIMT1	Q9UNQ2	313 aa	Known RBP	10.89	□□□□□ -0.67
SREBF1-223	ENST00000584760	IGKV1-12	A0A0C4DH73	117 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760		H0YAE9	185 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	NPFF	O15130	113 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	IGKV1D-12	P01611	117 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	BCL3	P20749	454 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	CAPG	P40121	348 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	NPBWR2	P48146	333 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	PDZK1IP1	Q13113	114 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	BLMH	Q13867	455 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	ZNF273	Q14593	569 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	CDK5R1	Q15078	307 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	CCDC58	Q4VC31	144 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	TMEM200B	Q69YZ2	307 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	ASPHD2	Q6ICH7	369 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	LAIR2	Q6ISS4	152 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	MKX	Q8IYA7	352 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	PNKD	Q8N490	385 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	C11orf42	Q8N5U0	333 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	ASCC1	Q8N9N2	400 aa	Known RBP	10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	EMG1	Q92979	244 aa	Known RBP	10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	RFT1	Q96AA3	541 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	SPACA5	Q96QH8	159 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	CHIA	Q9BZP6	476 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	ZCCHC4	Q9H5U6	513 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	SEBOX	Q9HB31	216 aa	Predicted RBP	10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	CAB39	Q9Y376	341 aa	Predicted RBP	10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	POMT1	Q9Y6A1	747 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	HSPE1-MOB4	S4R3N1	261 aa		10.88	□□□□□ -0.67
SREBF1-223	ENST00000584760	TMEM82	A0PJX8	343 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	POM121C	A8CG34	1229 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	SULT1B1	O43704	296 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	ANGPTL7	O43827	346 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	INMT	O95050	263 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	ALX3	O95076	343 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	HAND1	O96004	215 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	IGHV4-59	P01825	116 aa		10.87	□□□□□ -0.67
SREBF1-223	ENST00000584760	CHRM2	P08172	466 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms