RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CCDC159P0C7I6 412 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 PEX2P28328 305 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 NCR3LG1Q68D85 454 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 LHFPL2Q6ZUX7 228 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 DHRSXQ8N5I4 330 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 PACRGLQ8N7B6 248 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 ASCC1Q8N9N2 400 aaKnown RBP16.75■□□□□ 0.27
SS18-224ENST00000584083 OR4M1Q8NGD0 313 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 CNIH3Q8TBE1 160 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 TBC1D15Q8TC07 691 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 SSMEM1Q8WWF3 244 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 EMG1Q92979 244 aaKnown RBP16.75■□□□□ 0.27
SS18-224ENST00000584083 SPSB1Q96BD6 273 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 OPALINQ96PE5 141 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 ZNF649Q9BS31 505 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 COMMD4Q9H0A8 199 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 FGF20Q9NP95 211 aaPredicted RBP16.75■□□□□ 0.27
SS18-224ENST00000584083 CAB39Q9Y376 341 aaPredicted RBP16.75■□□□□ 0.27
SS18-224ENST00000584083 FBN3Q75N90 2809 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 A0A1W2PPH5 198 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 TMEM212A6NML5 194 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 ANKRD65E5RJM6 399 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 NPFFO15130 113 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 CRYBA1P05813 215 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 CHRM2P08172 466 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 RPSAP08865 295 aaKnown RBP16.74■□□□□ 0.27
SS18-224ENST00000584083 COL10A1Q03692 680 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 Q8IYB0 196 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 TMEM86BQ8N661 226 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 SETD9Q8NE22 299 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 OR5D13Q8NGL4 314 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 OR13C9Q8NGT0 318 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 OR5AK2Q8NH90 309 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 RFT1Q96AA3 541 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 FAM234AQ9H0X4 552 aa16.74■□□□□ 0.27
SS18-224ENST00000584083 TRBV2A0A0J9YWF9 115 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 IRGMA1A4Y4 181 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 FAM181BA6NEQ2 426 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 K7N7A8 449 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 ZFPL1O95159 310 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 LIMS3P0CW19 117 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 LIMS4P0CW20 117 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 TMEM200BQ69YZ2 307 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 FIP1L1Q6UN15 594 aaKnown RBP16.73■□□□□ 0.27
SS18-224ENST00000584083 PNKDQ8N490 385 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 HAVCR2Q8TDQ0 301 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 TAF15Q92804 592 aaKnown RBP eCLIP16.73■□□□□ 0.27
SS18-224ENST00000584083 TNFRSF14Q92956 283 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 PDCD1LG2Q9BQ51 273 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 CHIAQ9BZP6 476 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 ZCCHC4Q9H5U6 513 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 UNKLQ9H9P5 680 aaKnown RBP16.73■□□□□ 0.27
SS18-224ENST00000584083 NEK6Q9HC98 313 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 POMT1Q9Y6A1 747 aa16.73■□□□□ 0.27
SS18-224ENST00000584083 ANK2Q01484 3957 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 MEIOCA2RUB1 952 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 SPRY1O43609 319 aaPredicted RBP16.72■□□□□ 0.27
SS18-224ENST00000584083 ANGPTL7O43827 346 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 IGHV4-59P01825 116 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 FBP1P09467 338 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 PIPP12273 146 aaPredicted RBP16.72■□□□□ 0.27
SS18-224ENST00000584083 BCL3P20749 454 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 DCKP27707 260 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 NPBWR2P48146 333 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 UBE2E1P51965 193 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 PDZK1IP1Q13113 114 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 TMPRSS11AQ6ZMR5 421 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 GDPD3Q7L5L3 318 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 FAM58AQ8N1B3 248 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 TSEN15Q8WW01 171 aaKnown RBP16.72■□□□□ 0.27
SS18-224ENST00000584083 SPACA5Q96QH8 159 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 JAM3Q9BX67 310 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 RBFOX1Q9NWB1 397 aaKnown RBP16.72■□□□□ 0.27
SS18-224ENST00000584083 DHDHQ9UQ10 334 aa16.72■□□□□ 0.27
SS18-224ENST00000584083 SF3B6Q9Y3B4 125 aaKnown RBP16.72■□□□□ 0.27
SS18-224ENST00000584083 DSCAML1Q8TD84 2053 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 hCG_1809904A0A1W2PP81 198 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 A0A1W2PPE2 198 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 A0A1W2PR64 198 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 A0A1W2PRV1 198 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 PAHP00439 452 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 CALCBP10092 127 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 OMGP23515 440 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 DUSP1P28562 367 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 SAA4P35542 130 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 ETV1P50549 477 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 GTF2A1P52655 376 aaPredicted RBP16.71■□□□□ 0.27
SS18-224ENST00000584083 SNU13P55769 128 aaKnown RBP16.71■□□□□ 0.27
SS18-224ENST00000584083 ADARB1P78563 741 aaKnown RBP16.71■□□□□ 0.27
SS18-224ENST00000584083 LDLRAD3Q86YD5 345 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 SERPINA12Q8IW75 414 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 OR5D14Q8NGL3 314 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 DPAGT1Q9H3H5 408 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 IL36RNQ9UBH0 155 aa16.71■□□□□ 0.27
SS18-224ENST00000584083 ZNF737O75373 536 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 HAND1O96004 215 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 MT-ND2P03891 347 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 HCKP08631 526 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 CCL3L1P16619 93 aa16.7■□□□□ 0.26
SS18-224ENST00000584083 PRKACAP17612 351 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms