RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ERVK13-1	Q9NX77	482 aa		3.69	□□□□□ -1.82
MSI2-216	ENST00000582772	ENOPH1	Q9UHY7	261 aa		3.69	□□□□□ -1.82
MSI2-216	ENST00000582772	KCNE5	Q9UJ90	142 aa		3.69	□□□□□ -1.82
MSI2-216	ENST00000582772	ZNF229	Q9UJW7	825 aa		3.69	□□□□□ -1.82
MSI2-216	ENST00000582772	STUB1	Q9UNE7	303 aa		3.69	□□□□□ -1.82
MSI2-216	ENST00000582772	DIMT1	Q9UNQ2	313 aa	Known RBP	3.69	□□□□□ -1.82
MSI2-216	ENST00000582772	ZNF443	Q9Y2A4	671 aa	Predicted RBP	3.69	□□□□□ -1.82
MSI2-216	ENST00000582772	RPL36	Q9Y3U8	105 aa	Known RBP	3.69	□□□□□ -1.82
MSI2-216	ENST00000582772	PEX16	Q9Y5Y5	336 aa		3.69	□□□□□ -1.82
MSI2-216	ENST00000582772		V9GYH0	126 aa		3.69	□□□□□ -1.82
MSI2-216	ENST00000582772	PNMA8C	A0A1B0GUJ8	204 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	ZC3H12D	A2A288	527 aa	Known RBP	3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	SMIM30	A4D0T7	59 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	LOC110117498-PIK3R3	F6TDL0	507 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	CDC42EP2	O14613	210 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	CYP7B1	O75881	506 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	GLCE	O94923	617 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	CDRT1	O95170	752 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	CH25H	O95992	272 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	PTTG1	O95997	202 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	IFI6	P09912	130 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	CPE	P16870	476 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	FUT1	P19526	365 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	RPS4Y1	P22090	263 aa	Known RBP	3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	HTR2A	P28223	471 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	RCVRN	P35243	200 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	GPR4	P46093	362 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	NKX2-5	P52952	324 aa	Predicted RBP	3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	MFAP2	P55001	183 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	TPTE	P56180	551 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	CAV3	P56539	151 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	OR2B6	P58173	313 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	FXYD6P3	P58550	94 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	NANOS2	P60321	138 aa	Known RBP	3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	FABP5	Q01469	135 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	IFITM2	Q01629	132 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	TSPAN31	Q12999	210 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	TPBG	Q13641	420 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	TRAM2	Q15035	370 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	SNAPC1	Q16533	368 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	MAPK14	Q16539	360 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	BAK1	Q16611	211 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	DUSP5	Q16690	384 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	CCNJ	Q5T5M9	372 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	ATAD3B	Q5T9A4	648 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	NXNL2	Q5VZ03	156 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	C22orf42	Q6IC83	251 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	WDR88	Q6ZMY6	472 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	RASSF6	Q6ZTQ3	369 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	ZAR1	Q86SH2	424 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	KRT73	Q86Y46	540 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	TMEM99	Q8N816	258 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	OR9Q1	Q8NGQ5	310 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	OR52P1P	Q8NH57	321 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	PHOSPHO1	Q8TCT1	267 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	MYOZ3	Q8TDC0	251 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	GPR151	Q8TDV0	419 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	RASSF5	Q8WWW0	418 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	TMEM234	Q8WY98	164 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	RGP1	Q92546	391 aa	Predicted RBP	3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	PIK3R3	Q92569	461 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	CDS1	Q92903	461 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	TMEM203	Q969S6	136 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	MALSU1	Q96EH3	234 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	SLC41A3	Q96GZ6	507 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	TXNDC15	Q96J42	360 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	LRR1	Q96L50	414 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	MCHR1	Q99705	422 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	SOST	Q9BQB4	213 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	PRSS27	Q9BQR3	290 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	RNF126	Q9BV68	326 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	MND1	Q9BWT6	205 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	OR2J1	Q9GZK6	312 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	POLR2J2	Q9GZM3	115 aa	Known RBP	3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	SRR	Q9GZT4	340 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	HOXD1	Q9GZZ0	328 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	MED20	Q9H944	212 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	MBNL3	Q9NUK0	354 aa	Known RBP	3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	GIMAP4	Q9NUV9	329 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	TXNL4B	Q9NX01	149 aa	Known RBP	3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	DNAJB11	Q9UBS4	358 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	C19orf53	Q9UNZ5	99 aa	Predicted RBP	3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	FBXO7	Q9Y3I1	522 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772	ZNF780B	Q9Y6R6	833 aa		3.68	□□□□□ -1.82
MSI2-216	ENST00000582772		A0A0B4J293	547 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772	IQCM	A0A1B0GVH7	501 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772		A0A1W2PQ09	198 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772	CCDC182	A6NF36	153 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772		I3L521	148 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772		J3QRE1	110 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772		M0QZK8	103 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772	MYL12B	O14950	172 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772	PLA2G10	O15496	165 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772	PRODH	O43272	600 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772	ZNF208	O43345	1280 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772	EIF4E2	O60573	245 aa	Known RBP	3.67	□□□□□ -1.82
MSI2-216	ENST00000582772	GUCY1B2	O75343	617 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772	NKX2-2	O95096	273 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772	OR5F1	O95221	314 aa		3.67	□□□□□ -1.82
MSI2-216	ENST00000582772	IL1A	P01583	271 aa		3.67	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms