RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 MADCAM1Q13477 382 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 ASAH1Q13510 395 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 OXA1LQ15070 435 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 RSPO1Q2MKA7 263 aaPredicted RBP8.73□□□□□ -1.01
SS18-221ENST00000582448 C2orf76Q3KRA6 126 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 KRTAP27-1Q3LI81 207 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 ZNF672Q499Z4 452 aaPredicted RBP8.73□□□□□ -1.01
SS18-221ENST00000582448 NCMAPQ5T1S8 102 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 ADAM5Q6NVV9 412 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 Q6ZNX1 250 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 MRPL21Q7Z2W9 205 aaKnown RBP8.73□□□□□ -1.01
SS18-221ENST00000582448 NAA40Q86UY6 237 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 CMTM4Q8IZR5 234 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 C17orf78Q8N4C9 275 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 STEAP2Q8NFT2 490 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 OR51A2Q8NGJ7 313 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 FGFBP3Q8TAT2 258 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 FCAMRQ8WWV6 532 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 PTX4Q96A99 478 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 HAVCR1Q96D42 359 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 THAP7Q9BT49 309 aaPredicted RBP8.73□□□□□ -1.01
SS18-221ENST00000582448 C19orf24Q9BVV8 132 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 C1QTNF5Q9BXJ0 243 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 ATG5Q9H1Y0 275 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 ESRP2Q9H6T0 727 aaKnown RBP8.73□□□□□ -1.01
SS18-221ENST00000582448 OBP2BQ9NPH6 170 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 ZNF319Q9P2F9 582 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 SLC7A11Q9UPY5 501 aa8.73□□□□□ -1.01
SS18-221ENST00000582448 STAB1Q9NY15 2570 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 hCG_2014768A0A024R1R8 64 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 IGHV4-30-2A0A087WSY4 118 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 A0A0A6YYH2 397 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 LINC00854A0A1B0GVQ3 168 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 A6NIN4 97 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 A6NJ64 397 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 CTDSPLO15194 276 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 PFDN1O60925 122 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 RAD51DO75771 328 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 CSF3P09919 207 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 GSTT2BP0CG30 244 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 PSMB1P20618 241 aaKnown RBP8.72□□□□□ -1.01
SS18-221ENST00000582448 MNDAP41218 407 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 TAB1Q15750 504 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 BAK1Q16611 211 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 SNAI3Q3KNW1 292 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 CLVS2Q5SYC1 327 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 AWAT2Q6E213 333 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 RAB12Q6IQ22 244 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 ZNF101Q8IZC7 436 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 CPEB3Q8NE35 698 aaKnown RBP8.72□□□□□ -1.01
SS18-221ENST00000582448 SLC30A7Q8NEW0 376 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 ENKURQ8TC29 256 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 SPSB1Q96BD6 273 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 SDHCQ99643 169 aaPredicted RBP8.72□□□□□ -1.01
SS18-221ENST00000582448 CHST5Q9GZS9 411 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 SHARPINQ9H0F6 387 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 CST11Q9H112 138 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 CDH20Q9HBT6 801 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 NGBQ9NPG2 151 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 TBCCD1Q9NVR7 557 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 CISD1Q9NZ45 108 aaKnown RBP8.72□□□□□ -1.01
SS18-221ENST00000582448 GHRLQ9UBU3 117 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 MRPS28Q9Y2Q9 187 aaKnown RBP8.72□□□□□ -1.01
SS18-221ENST00000582448 PRR14LQ5THK1 2151 aa8.72□□□□□ -1.01
SS18-221ENST00000582448 ZNF816-ZNF321PA0A0X1KG74 233 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 DPRXA6NFQ7 191 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 GGT3PA6NGU5 568 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 XRCC3O43542 346 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 GSTZ1O43708 216 aaPredicted RBP8.71□□□□□ -1.02
SS18-221ENST00000582448 LYZL6O75951 148 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 ECDO95905 644 aaPredicted RBP8.71□□□□□ -1.02
SS18-221ENST00000582448 CD8AP01732 235 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 HLA-DQB1P01920 261 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 CD37P11049 281 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 IGHV1-2P23083 117 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 FOXG1P55316 489 aaPredicted RBP8.71□□□□□ -1.02
SS18-221ENST00000582448 BSPH1Q075Z2 132 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 GABRA6Q16445 453 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 TMEM249Q2WGJ8 235 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 ASPHD2Q6ICH7 369 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 FAM166AQ6J272 317 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 ZNF529Q6P280 563 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 Q6ZSR3 168 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 IL17RELQ6ZVW7 336 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 OR2W3Q7Z3T1 314 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 MDP1Q86V88 176 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 TOMM5Q8N4H5 51 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 CSNK2A3Q8NEV1 391 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 OR52N4Q8NGI2 321 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 OR2AE1Q8NHA4 323 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 KCNG3Q8TAE7 436 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 FAM46BQ96A09 425 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 SLC25A28Q96A46 364 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 SLC25A38Q96DW6 304 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 POM121L2Q96KW2 1035 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 LYZL4Q96KX0 146 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 HIST1H2AAQ96QV6 131 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 OR10A4Q9H209 315 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 PCDHB16Q9NRJ7 776 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 ZNF224Q9NZL3 707 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms