RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 BANF2Q9H503 90 aa8□□□□□ -1.13
RFFL-210ENST00000582308 CHODLQ9H9P2 273 aa8□□□□□ -1.13
RFFL-210ENST00000582308 HMG20AQ9NP66 347 aa8□□□□□ -1.13
RFFL-210ENST00000582308 RASL12Q9NYN1 266 aa8□□□□□ -1.13
RFFL-210ENST00000582308 IL36RNQ9UBH0 155 aa8□□□□□ -1.13
RFFL-210ENST00000582308 GHRLQ9UBU3 117 aa8□□□□□ -1.13
RFFL-210ENST00000582308 NPTNQ9Y639 398 aa8□□□□□ -1.13
RFFL-210ENST00000582308 CLDN25C9JDP6 229 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 LGALS8O00214 317 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 TMEM127O75204 238 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 CRTAPO75718 401 aaPredicted RBP7.99□□□□□ -1.13
RFFL-210ENST00000582308 MPIG6BO95866 241 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 MGMTP16455 207 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 PRKACAP17612 351 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 GIFP27352 417 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 DUSP1P28562 367 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 SOX6P35712 828 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 EFNB2P52799 333 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 TMEM33P57088 247 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 FGF12P61328 243 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 GPR176Q14439 515 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 ZMYND11Q15326 602 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 CARTPTQ16568 116 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 MALRD1Q5VYJ5 2156 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 SFRP4Q6FHJ7 346 aaPredicted RBP7.99□□□□□ -1.13
RFFL-210ENST00000582308 METAP1DQ6UB28 335 aaPredicted RBP7.99□□□□□ -1.13
RFFL-210ENST00000582308 OR2W3Q7Z3T1 314 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 BIVMQ86UB2 503 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 CDH24Q86UP0 819 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 Q8IYB0 196 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 C1orf87Q8N0U7 546 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 OSR2Q8N2R0 312 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 DEFB108BQ8NET1 73 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 OR5T2Q8NGG2 359 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 OR51T1Q8NGJ9 327 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 KCNG3Q8TAE7 436 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 EMG1Q92979 244 aaKnown RBP7.99□□□□□ -1.13
RFFL-210ENST00000582308 NINJ1Q92982 152 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 KCTD12Q96CX2 325 aaKnown RBP7.99□□□□□ -1.13
RFFL-210ENST00000582308 NXF2Q9GZY0 626 aaKnown RBP7.99□□□□□ -1.13
RFFL-210ENST00000582308 RHOFQ9HBH0 211 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 BARX1Q9HBU1 254 aaPredicted RBP7.99□□□□□ -1.13
RFFL-210ENST00000582308 ZNF581Q9P0T4 197 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 ABRACLQ9P1F3 81 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 FBLN5Q9UBX5 448 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 RAB22AQ9UL26 194 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 SPATA2Q9UM82 520 aa7.99□□□□□ -1.13
RFFL-210ENST00000582308 VPS13CQ709C8 3753 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 WNK2Q9Y3S1 2297 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 IGKV1D-17A0A075B6S4 117 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 PPIAL4EA0A075B759 164 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 A0A0A6YYD4 124 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 OOEPA6NGQ2 149 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 RFPL4AA6NLU0 287 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 PPIAL4DF5H284 164 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 RFPL4AL1F8VTS6 287 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 TNFRSF13BO14836 293 aaPredicted RBP7.98□□□□□ -1.13
RFFL-210ENST00000582308 PPIHO43447 177 aaKnown RBP7.98□□□□□ -1.13
RFFL-210ENST00000582308 ZNF780AO75290 641 aaPredicted RBP7.98□□□□□ -1.13
RFFL-210ENST00000582308 FSTL3O95633 263 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 KNG1P01042 644 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 IGHV2-70P01814 119 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 CSTBP04080 98 aaKnown RBP7.98□□□□□ -1.13
RFFL-210ENST00000582308 TFF1P04155 84 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 PPIAL4FP0DN26 164 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 PSG2P11465 335 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 GTF2F2P13984 249 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 MUC1P15941 1255 aaPredicted RBP7.98□□□□□ -1.13
RFFL-210ENST00000582308 AMY2BP19961 511 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 RANBP1P43487 201 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 PDLIM4P50479 330 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 BMXP51813 675 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 CAPZA1P52907 286 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 SNU13P55769 128 aaKnown RBP7.98□□□□□ -1.13
RFFL-210ENST00000582308 RBM11P57052 281 aaKnown RBP7.98□□□□□ -1.13
RFFL-210ENST00000582308 SCAND1P57086 179 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 BTG1P62324 171 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 DYNC1I2Q13409 638 aaKnown RBP7.98□□□□□ -1.13
RFFL-210ENST00000582308 ZNF146Q15072 292 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 PDCD1Q15116 288 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 SMIM21Q3B7S5 101 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 PIGYQ3MUY2 71 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 NHLRC3Q5JS37 347 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 AVPI1Q5T686 147 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 TEX36Q5VZQ5 186 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 DNM1P46Q6ZS02 220 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 LRRC28Q86X40 367 aaPredicted RBP7.98□□□□□ -1.13
RFFL-210ENST00000582308 FAM90A1Q86YD7 464 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 LRRC75A-AS1Q8N1F1 130 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 ACOT12Q8WYK0 555 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 AP3S1Q92572 193 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 SLC25A38Q96DW6 304 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 MRPS24Q96EL2 167 aaKnown RBP7.98□□□□□ -1.13
RFFL-210ENST00000582308 Q96M66 194 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 MRI1Q9BV20 369 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 SELENOIQ9C0D9 397 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 CST11Q9H112 138 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 LPAR5Q9H1C0 372 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 TMEM165Q9HC07 324 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 MYOZ1Q9NP98 299 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms