RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	KRT8	P05787	483 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ZNF728	P0DKX0	622 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	HOXB6	P17509	224 aa	Known RBP	9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	SNU13	P55769	128 aa	Known RBP	9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	IL24	Q13007	206 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	CNN3	Q15417	329 aa	Known RBP	9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	UBE2V2	Q15819	145 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	DNAL1	Q4LDG9	190 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	SLX4IP	Q5VYV7	408 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	NXNL2	Q5VZ03	156 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114		Q6ZPA2	131 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	SLC25A26	Q70HW3	274 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	TCF23	Q7RTU1	214 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	TMEM163	Q8TC26	289 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	RPS4Y2	Q8TD47	263 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ITFG2	Q969R8	447 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	UTP4	Q969X6	686 aa	Known RBP	9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	FOXRED1	Q96CU9	486 aa	Predicted RBP	9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	R3HDM4	Q96D70	268 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	NRBF2	Q96F24	287 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	CEP19	Q96LK0	163 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	CITED2	Q99967	270 aa	Predicted RBP	9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	CDCA4	Q9BXL8	241 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	PKIB	Q9C010	78 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	SLC7A11	Q9UPY5	501 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114		A0A1W2PQL4	384 aa	Predicted RBP	9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114		A0A1W2PRX2	142 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	TMEM82	A0PJX8	343 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ZAR1L	A6NP61	321 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	VGLL3	A8MV65	326 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	F2RL2	O00254	374 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	SYT7	O43581	403 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ZNF737	O75373	536 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	IGHA1	P01876	353 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	CHRM2	P08172	466 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	IGHV1-8	P0DP01	117 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	GABRR1	P24046	479 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	DUSP1	P28562	367 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	BLCAP	P62952	87 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	SLC34A1	Q06495	639 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ZNF626	Q68DY1	528 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	C12orf73	Q69YU5	71 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	CATSPERD	Q86XM0	798 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	OR8H2	Q8N162	312 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	OR10H4	Q8NGA5	316 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	NDNF	Q8TB73	568 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	EMG1	Q92979	244 aa	Known RBP	9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	MALSU1	Q96EH3	234 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ZNF714	Q96N38	554 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	MNT	Q99583	582 aa		9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	TBL2	Q9Y4P3	447 aa	Known RBP	9.37	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	DHRS7C	A6NNS2	312 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114		G3V2T6	193 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	PIN1P1	O15428	100 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	DNAJC8	O75937	253 aa	Predicted RBP	9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	HAND1	O96004	215 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	CCL1	P22362	96 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	POLR2I	P36954	125 aa	Known RBP	9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	POU3F4	P49335	361 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	OR12D2	P58182	307 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ACTA2	P62736	377 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ACTG2	P63267	376 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ACTC1	P68032	377 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ACTA1	P68133	377 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	EFNB1	P98172	346 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	GRK1	Q15835	563 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	FBLN7	Q53RD9	439 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	KPRP	Q5T749	579 aa	Predicted RBP	9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	BAIAP2L2	Q6UXY1	529 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114		Q6ZSR3	168 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	AMIGO2	Q86SJ2	522 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	EGFL6	Q8IUX8	553 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	GID4	Q8IVV7	300 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	RDH10	Q8IZV5	341 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114		Q8N2B8	174 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ZNF676	Q8N7Q3	588 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	OR4S1	Q8NGB4	309 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	OR11H6	Q8NGC7	330 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	OR52N4	Q8NGI2	321 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	MRAP	Q8TCY5	172 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	SGCD	Q92629	289 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	BORCS8	Q96FH0	119 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	SNX22	Q96L94	193 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ADI1	Q9BV57	179 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	PRSS22	Q9GZN4	317 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	RBFOX1	Q9NWB1	397 aa	Known RBP	9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	DSCAML1	Q8TD84	2053 aa		9.36	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	IGHV2-26	A0A0B4J1V2	119 aa		9.35	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	LOC107986453	A0A1B0GWG9	222 aa		9.35	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	FAM172BP	A6NC97	362 aa		9.35	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	METTL15	A6NJ78	407 aa		9.35	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ADARB2-AS1	A8MUL3	147 aa		9.35	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	PSPN	O60542	156 aa		9.35	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	GATB	O75879	557 aa	Known RBP	9.35	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	MMP23A	O75900	390 aa		9.35	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	BCL3	P20749	454 aa		9.35	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	CD24	P25063	80 aa		9.35	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	VDAC2	P45880	294 aa	Predicted RBP	9.35	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms