RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CEP19Q96LK0 163 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 S100A13Q99584 98 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 PKIBQ9C010 78 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 CST11Q9H112 138 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 ABCG5Q9H222 651 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 COMMD3Q9UBI1 195 aa13.04□□□□□ -0.32
SS18-216ENST00000580751 MRPS28Q9Y2Q9 187 aaKnown RBP13.04□□□□□ -0.32
SS18-216ENST00000580751 ZANQ9Y493 2812 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 A0A096LNT2 108 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 A0A0A6YYH2 397 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 ISPDA4D126 451 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 A6NJ64 397 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 J3QT63 122 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 RGS5O15539 181 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 CYB5AP00167 134 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 IGHV2-70P01814 119 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 MPZP25189 248 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 TALDO1P37837 337 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 MDH2P40926 338 aaKnown RBP13.03□□□□□ -0.32
SS18-216ENST00000580751 HAAOP46952 286 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 ZP1P60852 638 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 ZNF45Q02386 682 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 PDZK1IP1Q13113 114 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 C2orf76Q3KRA6 126 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 UBE2NLQ5JXB2 153 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 SPANXN2Q5MJ10 180 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 HAGHLQ6PII5 290 aaPredicted RBP13.03□□□□□ -0.32
SS18-216ENST00000580751 BAIAP2L2Q6UXY1 529 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 ZNF826PQ6ZT77 177 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 C11orf53Q8IXP5 236 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 MKXQ8IYA7 352 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 MUC20Q8N307 709 aaPredicted RBP13.03□□□□□ -0.32
SS18-216ENST00000580751 OR4D6Q8NGJ1 314 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 KCNG3Q8TAE7 436 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 LRRC29Q8WV35 223 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 AQP3Q92482 292 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 COX4I2Q96KJ9 171 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 HMG20AQ9NP66 347 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 OR5V1Q9UGF6 321 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 RAB22AQ9UL26 194 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 POLDIP2Q9Y2S7 368 aa13.03□□□□□ -0.32
SS18-216ENST00000580751 PPIAL4EA0A075B759 164 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 IGHV4-61A0A0C4DH41 118 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 PPIAL4DF5H284 164 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 CTDSP2O14595 271 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 LDLRAD4O15165 306 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 HEXAP06865 529 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 PPIAL4FP0DN26 164 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 POU3F4P49335 361 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 QRFPP83859 136 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 IL24Q13007 206 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 ZMYND11Q15326 602 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 TMEM155Q4W5P6 130 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 AWAT2Q6E213 333 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 CRIP3Q6Q6R5 217 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 CCDC190Q86UF4 302 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 SPICQ8N5J4 248 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 GCSAMQ8N6F7 178 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 SAMD12Q8N8I0 201 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 Q8NFD4 153 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 OR51D1Q8NGF3 324 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 LGALS14Q8TCE9 139 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 C15orf40Q8WUR7 153 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 TNFAIP8L1Q8WVP5 186 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 C18orf12Q96KH6 178 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 GAL3ST1Q99999 423 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 NUDT16L1Q9BRJ7 211 aaKnown RBP13.02□□□□□ -0.33
SS18-216ENST00000580751 METTL9Q9H1A3 318 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 PPIAL4AQ9Y536 164 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 TLN2Q9Y4G6 2542 aa13.02□□□□□ -0.33
SS18-216ENST00000580751 IGKV1-27A0A075B6S5 117 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 METTL21EPA6NDL7 271 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 TMEM14DPA8MWL7 114 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 SRRM5B3KS81 715 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 H3BUI4 141 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 PAHP00439 452 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 LHBP01229 141 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 TMEM225BP0DP42 221 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 CD99P14209 185 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 SNRPBP14678 240 aaKnown RBP13.01□□□□□ -0.33
SS18-216ENST00000580751 FOSL1P15407 271 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 TNFSF8P32971 234 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 KCNJ8Q15842 424 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 RAB12Q6IQ22 244 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 GLIPR1L1Q6UWM5 242 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 Q8IYB0 196 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 BOLLQ8N9W6 283 aaKnown RBP13.01□□□□□ -0.33
SS18-216ENST00000580751 S100A16Q96FQ6 103 aaKnown RBP13.01□□□□□ -0.33
SS18-216ENST00000580751 C1orf147Q96MC9 270 aaPredicted RBP13.01□□□□□ -0.33
SS18-216ENST00000580751 TMUB1Q9BVT8 246 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 WDR12Q9GZL7 423 aaKnown RBP13.01□□□□□ -0.33
SS18-216ENST00000580751 MIXL1Q9H2W2 232 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 NARFLQ9H6Q4 476 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 AKIP1Q9NQ31 210 aa13.01□□□□□ -0.33
SS18-216ENST00000580751 TRAV38-1A0A0B4J264 116 aa13□□□□□ -0.33
SS18-216ENST00000580751 OOEPA6NGQ2 149 aa13□□□□□ -0.33
SS18-216ENST00000580751 LGALS8O00214 317 aa13□□□□□ -0.33
SS18-216ENST00000580751 SMAD7O15105 426 aaKnown RBP13□□□□□ -0.33
SS18-216ENST00000580751 AKR7A2O43488 359 aa13□□□□□ -0.33
SS18-216ENST00000580751 HPGDSO60760 199 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms