RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 MICU1Q9BPX6 476 aa11□□□□□ -0.65
CSNK1D-211ENST00000579316 PPP1R3EQ9H7J1 279 aa11□□□□□ -0.65
CSNK1D-211ENST00000579316 LIN7BQ9HAP6 207 aa11□□□□□ -0.65
CSNK1D-211ENST00000579316 SMPD3Q9NY59 655 aaPredicted RBP11□□□□□ -0.65
CSNK1D-211ENST00000579316 GMPPBQ9Y5P6 360 aa11□□□□□ -0.65
CSNK1D-211ENST00000579316 SORL1Q92673 2214 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 TMEM210A6NLX4 147 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 SNTNA6NMZ2 147 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 ZNF878C9JN71 531 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 H3BUI4 141 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 M0R129 80 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 AKR7A2O43488 359 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 ARG1P05089 322 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 LPLP06858 475 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 PGA5P0DJD9 388 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 PSG2P11465 335 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 CCL3L1P16619 93 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 JUNBP17275 347 aaPredicted RBP10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 PEX2P28328 305 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 GNALP38405 381 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 LUMP51884 338 aaPredicted RBP10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 DLX6P56179 175 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 EIF2B1Q14232 305 aaKnown RBP10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 LRRC36Q1X8D7 754 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 LPCAT4Q643R3 524 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 ZNF782Q6ZMW2 699 aaPredicted RBP10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 C8orf86Q6ZUL3 223 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 SLC16A9Q7RTY1 509 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 CALHM1Q8IU99 346 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 TIGD4Q8IY51 512 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 RPL3LQ92901 407 aaKnown RBP10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 RFKQ969G6 155 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 SLAMF6Q96DU3 332 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 AKR1E2Q96JD6 320 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 CNN2Q99439 309 aaKnown RBP10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 TEAD3Q99594 435 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 COPS4Q9BT78 406 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 RTL8AQ9BWD3 113 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 SMAD5-AS1Q9Y6J3 95 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 KIAA1109Q2LD37 5005 aa10.99□□□□□ -0.65
CSNK1D-211ENST00000579316 hCG_38984A0A1B0GV85 526 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 C17orf98A8MV24 154 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 CASQ2O14958 399 aaPredicted RBP10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 MPZL2O60487 215 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 SELENOFO60613 162 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 APOC1P02654 83 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 DCTDP32321 178 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 ECI1P42126 302 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 RPS27P42677 84 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 GABRA2P47869 451 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 OR12D2P58182 307 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 GRB2P62993 217 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 EFNB1P98172 346 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 SLC34A1Q06495 639 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 AADACL4Q5VUY2 407 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 MEDAGQ5VYS4 303 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 OR13D1Q8NGV5 346 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 MBOAT4Q96T53 435 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 APOL4Q9BPW4 351 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 YIPF3Q9GZM5 350 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 CENPMQ9NSP4 180 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 ZFP57Q9NU63 452 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 WARS2Q9UGM6 360 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.98□□□□□ -0.653e-7■■■□□ 17.6
CSNK1D-211ENST00000579316 TMEM14AQ9Y6G1 99 aa10.98□□□□□ -0.65
CSNK1D-211ENST00000579316 LOC100130705A0A1B0GUX0 176 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 CCDC182A6NF36 153 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 ANXA2P2A6NMY6 339 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 JTBO76095 146 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 RBP4P02753 201 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 LYNP07948 512 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 SLC2A1P11166 492 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 HSD11B1P28845 292 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 TMED1Q13445 227 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 ZNF273Q14593 569 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 ABCA11PQ4W5N1 156 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 C9orf66Q5T8R8 295 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 OGFRL1Q5TC84 451 aaPredicted RBP10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 MINOS1Q5TGZ0 78 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 TTC23Q5W5X9 447 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 C18orf65Q6ZTR6 163 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 CSNK2A3Q8NEV1 391 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 OTOSQ8NHW6 89 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 THEM6Q8WUY1 208 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 Q96MT0 163 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 MNTQ99583 582 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 ABHD6Q9BV23 337 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 PAPOLGQ9BWT3 736 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 VCX3BQ9H321 246 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 SP140LQ9H930 580 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 EDA2RQ9HAV5 297 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 FAM118AQ9NWS6 357 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 SCOCQ9UIL1 159 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 LAMP5Q9UJQ1 280 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 ZNF256Q9Y2P7 627 aaPredicted RBP10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 RHBDD3Q9Y3P4 386 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 MPC1Q9Y5U8 109 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 MINOS1-NBL1R4GNA1 71 aa10.97□□□□□ -0.65
CSNK1D-211ENST00000579316 PSMB11A5LHX3 300 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms