RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 POM121CA8CG34 1229 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 PRRG2O14669 202 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 HOXC12P31275 282 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 KISS1Q15726 138 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 GLIPR1L1Q6UWM5 242 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 LYG2Q86SG7 212 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 FJX1Q86VR8 437 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 ST8SIA2Q92186 375 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 APOBEC3DQ96AK3 386 aaPredicted RBP17.45■□□□□ 0.38
SMG8-203ENST00000578922 TNFSF18Q9UNG2 199 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 NOP16Q9Y3C1 178 aaKnown RBP17.45■□□□□ 0.38
SMG8-203ENST00000578922 PRR14LQ5THK1 2151 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 SPDEFO95238 335 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 HLA-AP01891 365 aaKnown RBP17.45■□□□□ 0.38
SMG8-203ENST00000578922 ZBTB25P24278 435 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 C11orf87Q6NUJ2 197 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 ACBD4Q8NC06 268 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 CCDC54Q8NEL0 328 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 ZNF391Q9UJN7 358 aa17.45■□□□□ 0.38
SMG8-203ENST00000578922 CACNA1AO00555 2505 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 FAM230AA0A1W2PPH8 454 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 KANTRA0A1W2PQU2 76 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 RLN2P04090 185 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 VSIG8P0DPA2 414 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 GLI4P10075 376 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 ZNF14P17017 642 aaPredicted RBP17.44■□□□□ 0.38
SMG8-203ENST00000578922 ATRXP46100 2492 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 QRFPP83859 136 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 UNC119Q13432 240 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 CDNFQ49AH0 187 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 PXDC1Q5TGL8 231 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 TRAPPC6BQ86SZ2 158 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 PXT1Q8NFP0 134 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 PIGCQ92535 297 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 SPSB4Q96A44 273 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 C10orf35Q96D05 121 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 PHYHIPLQ96FC7 376 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 ZMAT3Q9HA38 289 aaKnown RBP17.44■□□□□ 0.38
SMG8-203ENST00000578922 RASL12Q9NYN1 266 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 VSIG4Q9Y279 399 aa17.44■□□□□ 0.38
SMG8-203ENST00000578922 TIMP3P35625 211 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 MALLQ13021 153 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 SPATA46Q5T0L3 261 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 CRIP3Q6Q6R5 217 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 MRPL21Q7Z2W9 205 aaKnown RBP17.43■□□□□ 0.38
SMG8-203ENST00000578922 WDR31Q8NA23 367 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 MITD1Q8WV92 249 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 PDCD10Q9BUL8 212 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 COQ3Q9NZJ6 369 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 A0A1W2PP11 408 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 DHRS7CA6NNS2 312 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 NRASP01111 189 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 PRF1P14222 555 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 OR8B8Q15620 311 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 TBC1D28Q2M2D7 210 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 ALKBH2Q6NS38 261 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 C1QL2Q7Z5L3 287 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 OR56B2PQ8NGI1 322 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 SSC4DQ8WTU2 575 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 PHB2Q99623 299 aa17.43■□□□□ 0.38
SMG8-203ENST00000578922 BCL2L11O43521 198 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 PLATP00750 562 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 ZNF474Q6S9Z5 364 aaPredicted RBP17.42■□□□□ 0.38
SMG8-203ENST00000578922 BEND4Q6ZU67 534 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 ACOT7LQ6ZUV0 252 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 BHLHE23Q8NDY6 225 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 OR4S1Q8NGB4 309 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 REPIN1Q9BWE0 567 aaKnown RBP17.42■□□□□ 0.38
SMG8-203ENST00000578922 BANF2Q9H503 90 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 CRIM1Q9NZV1 1036 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 CRHP06850 196 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 BMP5P22003 454 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 IL32P24001 234 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 MTCP1P56278 107 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 MOB3CQ70IA8 216 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 BHLHA15Q7RTS1 189 aaPredicted RBP17.42■□□□□ 0.38
SMG8-203ENST00000578922 CCDC36Q8IYA8 594 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 PNLDC1Q8NA58 520 aaKnown RBP17.42■□□□□ 0.38
SMG8-203ENST00000578922 TMEM104Q8NE00 496 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 ST8SIA4Q92187 359 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 DMRTA2Q96SC8 542 aa17.42■□□□□ 0.38
SMG8-203ENST00000578922 ZNF230Q9UIE0 474 aaPredicted RBP17.42■□□□□ 0.38
SMG8-203ENST00000578922 WIPF3A6NGB9 483 aa17.41■□□□□ 0.38
SMG8-203ENST00000578922 TPD52L2O43399 206 aaKnown RBP17.41■□□□□ 0.38
SMG8-203ENST00000578922 CHRM2P08172 466 aa17.41■□□□□ 0.38
SMG8-203ENST00000578922 CEACAM8P31997 349 aaPredicted RBP17.41■□□□□ 0.38
SMG8-203ENST00000578922 SLC22A6Q4U2R8 563 aa17.41■□□□□ 0.38
SMG8-203ENST00000578922 PLCXD3Q63HM9 321 aa17.41■□□□□ 0.38
SMG8-203ENST00000578922 CHST4Q8NCG5 386 aa17.41■□□□□ 0.38
SMG8-203ENST00000578922 OR10K1Q8NGX5 313 aa17.41■□□□□ 0.38
SMG8-203ENST00000578922 CMBLQ96DG6 245 aa17.41■□□□□ 0.38
SMG8-203ENST00000578922 ELL3Q9HB65 397 aaPredicted RBP17.41■□□□□ 0.38
SMG8-203ENST00000578922 IFT46Q9NQC8 304 aa17.41■□□□□ 0.38
SMG8-203ENST00000578922 GPR160Q9UJ42 338 aa17.41■□□□□ 0.38
SMG8-203ENST00000578922 ZNF816-ZNF321PA0A0X1KG74 233 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 C9orf170A2RU37 121 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 ZNF850A8MQ14 1090 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 MPIG6BO95866 241 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 PTGFRP43088 359 aa17.4■□□□□ 0.38
SMG8-203ENST00000578922 BTN1A1Q13410 526 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms