RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 DLX6P56179 175 aa13.49□□□□□ -0.25
CDK5RAP3-206ENST00000578018 ODF4Q2M2E3 257 aa13.49□□□□□ -0.25
CDK5RAP3-206ENST00000578018 C11orf88Q6PI97 169 aa13.49□□□□□ -0.25
CDK5RAP3-206ENST00000578018 ZNF782Q6ZMW2 699 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-206ENST00000578018 CATSPERDQ86XM0 798 aa13.49□□□□□ -0.25
CDK5RAP3-206ENST00000578018 YIPF7Q8N8F6 280 aa13.49□□□□□ -0.25
CDK5RAP3-206ENST00000578018 PIFOQ8TCI5 191 aa13.49□□□□□ -0.25
CDK5RAP3-206ENST00000578018 RIBC2Q9H4K1 309 aa13.49□□□□□ -0.25
CDK5RAP3-206ENST00000578018 PLEKHA1Q9HB21 404 aa13.49□□□□□ -0.25
CDK5RAP3-206ENST00000578018 WARS2Q9UGM6 360 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-206ENST00000578018 PLXNB1O43157 2135 aa13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 FAM230AA0A1W2PPH8 454 aa13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 A0A1W2PQL4 384 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 C17orf98A8MV24 154 aa13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 ZNF737O75373 536 aa13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 COL10A1Q03692 680 aa13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 UBE2V2Q15819 145 aa13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 OGFRL1Q5TC84 451 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 LIAT1Q6ZQX7 453 aa13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 Q6ZTK2 550 aa13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 LHFPL4Q7Z7J7 247 aa13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 C1QL4Q86Z23 238 aa13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 ASCC1Q8N9N2 400 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 TRUB1Q8WWH5 349 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 MBOAT4Q96T53 435 aa13.48□□□□□ -0.25
CDK5RAP3-206ENST00000578018 IGKV1-27A0A075B6S5 117 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 FAM90A8PA6NJQ4 464 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 VGLL3A8MV65 326 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 ODF3BA8MYP8 253 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 F8VVB4 439 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 F8VWA3 439 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 H3BSH0 61 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 SYT7O43581 403 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 APOL3O95236 402 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 OR2T7P0C7T2 308 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 HTR1FP30939 366 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 LGALS4P56470 323 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 SLC34A1Q06495 639 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 RIPK1Q13546 671 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 DYNAPQ8N1N2 210 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 KLHDC1Q8N7A1 406 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 OR2T6Q8NHC8 308 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 CFHR4Q92496 578 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 CEP19Q96LK0 163 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 NPFFR1Q9GZQ6 430 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 CHST5Q9GZS9 411 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 MTCH1Q9NZJ7 389 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 NKX1-2Q9UD57 310 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 FOXJ3Q9UPW0 622 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 SLC7A11Q9UPY5 501 aa13.47□□□□□ -0.25
CDK5RAP3-206ENST00000578018 A0A0G2JK05 382 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 MEX3AA1L020 520 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 METTL15A6NJ78 407 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 SLC16A6O15403 523 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 GATBO75879 557 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 SULT1C4O75897 302 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 RBP4P02753 201 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 PEX2P28328 305 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 CDC42P60953 191 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 ZIK1Q3SY52 487 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 SLC25A30Q5SVS4 291 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 LPCAT4Q643R3 524 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 HIST2H2BDQ6DRA6 164 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 TCF23Q7RTU1 214 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 OR8H2Q8N162 312 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 OR10H4Q8NGA5 316 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 OR8J1Q8NGP2 316 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 SLAMF9Q96A28 289 aa13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 SMPD3Q9NY59 655 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 TBL2Q9Y4P3 447 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-206ENST00000578018 LOC107986453A0A1B0GWG9 222 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 H0YHG0 523 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 RRP9O43818 475 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 ARG1P05089 322 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 CHRM2P08172 466 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 ZNF728P0DKX0 622 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 FUT6P51993 359 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 EDDM3BP56851 147 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 ISL1P61371 349 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 PLA1AQ53H76 456 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 LDLRAD2Q5SZI1 272 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 ZNF626Q68DY1 528 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 SLC25A26Q70HW3 274 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 PRSS35Q8N3Z0 413 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 C11orf44Q8N8P7 122 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 CCDC54Q8NEL0 328 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 OR13D1Q8NGV5 346 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 FOXRED1Q96CU9 486 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 ZNF702PQ9H963 129 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 FAM118AQ9NWS6 357 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 TCF19Q9Y242 345 aa13.45□□□□□ -0.26
CDK5RAP3-206ENST00000578018 LOC100130705A0A1B0GUX0 176 aa13.44□□□□□ -0.26
CDK5RAP3-206ENST00000578018 TMEM82A0PJX8 343 aa13.44□□□□□ -0.26
CDK5RAP3-206ENST00000578018 IGHV1-8P0DP01 117 aa13.44□□□□□ -0.26
CDK5RAP3-206ENST00000578018 KIR3DL2P43630 455 aa13.44□□□□□ -0.26
CDK5RAP3-206ENST00000578018 SNRPGP62308 76 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-206ENST00000578018 LRRC36Q1X8D7 754 aa13.44□□□□□ -0.26
CDK5RAP3-206ENST00000578018 GDPD3Q7L5L3 318 aa13.44□□□□□ -0.26
CDK5RAP3-206ENST00000578018 OR11H6Q8NGC7 330 aa13.44□□□□□ -0.26
CDK5RAP3-206ENST00000578018 RNF166Q96A37 237 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms