RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ACP7Q6ZNF0 438 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 SERPINA12Q8IW75 414 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 STX19Q8N4C7 294 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 OR51A4Q8NGJ6 313 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 OR5D14Q8NGL3 314 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 OR10AC1Q8NH08 325 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 GATAD2BQ8WXI9 593 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 SPSB1Q96BD6 273 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 NRIP2Q9BQI9 281 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 CHIAQ9BZP6 476 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 C1RLQ9NZP8 487 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 CLEC2DQ9UHP7 191 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 PSORS1C1Q9UIG5 152 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 DHDHQ9UQ10 334 aa13.2□□□□□ -0.3
VAPA-204ENST00000577901 A0A0G2JK05 382 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 XPNPEP2O43895 674 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 NDUFA7O95182 113 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 AMY2BP19961 511 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 AZGP1P25311 298 aaKnown RBP13.19□□□□□ -0.3
VAPA-204ENST00000577901 RUSC1-AS1Q66K80 236 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 LAIR2Q6ISS4 152 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 BRICD5Q6PL45 260 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 LHFPL2Q6ZUX7 228 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 TMEM86BQ8N661 226 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 OR52N1Q8NH53 320 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 TSEN15Q8WW01 171 aaKnown RBP13.19□□□□□ -0.3
VAPA-204ENST00000577901 ZNF488Q96MN9 340 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 GAFA1Q96PS6 74 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 CITED1Q99966 193 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 PCGF1Q9BSM1 259 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 ZCCHC4Q9H5U6 513 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 CNTD2Q9H8S5 307 aa13.19□□□□□ -0.3
VAPA-204ENST00000577901 SLC25A10Q9UBX3 287 aaPredicted RBP13.19□□□□□ -0.3
VAPA-204ENST00000577901 RPUSD1Q9UJJ7 312 aaKnown RBP13.19□□□□□ -0.3
VAPA-204ENST00000577901 IGKV1D-17A0A075B6S4 117 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 IGKV1-27A0A075B6S5 117 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 IGKV1-9A0A0C4DH69 117 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 A0A1B0GW55 424 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 CLPSL1A2RUU4 121 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 RFPL4AA6NLU0 287 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 ZNF879B4DU55 563 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 RFPL4AL1F8VTS6 287 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 SIGLEC5O15389 551 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 SFTPBP07988 381 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 MELTFP08582 738 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 DUX4L2P0CJ85 424 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 DUX4L3P0CJ86 424 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 DUX4L4P0CJ87 422 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 DUX4L5P0CJ88 424 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 DUX4L6P0CJ89 424 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 DUX4L7P0CJ90 424 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 PRDX2P32119 198 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 CDK5R1Q15078 307 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 DGUOKQ16854 277 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 METTL11BQ5VVY1 283 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 DUX4L9Q6RFH8 374 aaPredicted RBP13.18□□□□□ -0.3
VAPA-204ENST00000577901 SLC25A26Q70HW3 274 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 AHSA2Q719I0 299 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 MKXQ8IYA7 352 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 PARP16Q8N5Y8 322 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 GPR148Q8TDV2 347 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 CEP19Q96LK0 163 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 DMRTB1Q96MA1 342 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 OPALINQ96PE5 141 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 SCN3BQ9NY72 215 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 DUX4Q9UBX2 424 aa13.18□□□□□ -0.3
VAPA-204ENST00000577901 DOCK11Q5JSL3 2073 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 M0QZ24 198 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 SLC1A7O00341 560 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 MYL12BO14950 172 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 OGG1O15527 345 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 FCN3O75636 299 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 TOX4O94842 621 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 ALX3O95076 343 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 MT-ND2P03891 347 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 CD2P06729 351 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 NDUFB7P17568 137 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 HSPA13P48723 471 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 CAV3P56539 151 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 ERVK11-1P61568 191 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 RIPK1Q13546 671 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 C6orf141Q5SZD1 244 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 Q8IYB0 196 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 ZNF561Q8N587 486 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 OR13C9Q8NGT0 318 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 H1FXQ92522 213 aaKnown RBP13.17□□□□□ -0.3
VAPA-204ENST00000577901 SDSLQ96GA7 329 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 MMP27Q9H306 513 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 HES4Q9HCC6 221 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 MTCH1Q9NZJ7 389 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 ZNF222Q9UK12 451 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 ERGIC3Q9Y282 383 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 POMT1Q9Y6A1 747 aa13.17□□□□□ -0.3
VAPA-204ENST00000577901 CENPVL3A0A0U1RRI6 287 aa13.16□□□□□ -0.3
VAPA-204ENST00000577901 PTGES3LE9PB15 166 aa13.16□□□□□ -0.3
VAPA-204ENST00000577901 TIMM23O14925 209 aa13.16□□□□□ -0.3
VAPA-204ENST00000577901 TFF1P04155 84 aa13.16□□□□□ -0.3
VAPA-204ENST00000577901 SELLP14151 372 aa13.16□□□□□ -0.3
VAPA-204ENST00000577901 C21orf33P30042 268 aaPredicted RBP13.16□□□□□ -0.3
VAPA-204ENST00000577901 CAPZA1P52907 286 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms