RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 RIDAP52758 137 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 ERVK11-1P61568 191 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 ROM1Q03395 351 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 GINS1Q14691 196 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 FAM98BQ52LJ0 330 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 SLX4IPQ5VYV7 408 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 TMEM42Q69YG0 159 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 UNQ9370/PRO34162Q6UXP9 181 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 TCF23Q7RTU1 214 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 RNF144BQ7Z419 303 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 MRPL41Q8IXM3 137 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 ZNF679Q8IYX0 411 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 ASB17Q8WXJ9 295 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 SNX22Q96L94 193 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 CEP19Q96LK0 163 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 ELAC2Q9BQ52 826 aaKnown RBP9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 ZNF649Q9BS31 505 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 TEX12Q9BXU0 123 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 GTF2A1LQ9UNN4 478 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 TMEM14AQ9Y6G1 99 aa9.29□□□□□ -0.92
CTDNEP1-212ENST00000576613 ARRDC5A6NEK1 342 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 DHRS7CA6NNS2 312 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 LOC110117498-PIK3R3F6TDL0 507 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 M0QZK8 103 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 E2F6O75461 281 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 OR2F2O95006 317 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 TTRP02766 147 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 CD24P25063 80 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 PEX2P28328 305 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 SLC6A1P30531 599 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 HCCSP53701 268 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 APOFQ13790 326 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 KLHL22Q53GT1 634 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 HSP90B2PQ58FF3 399 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 BCL2L15Q5TBC7 163 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 OR52W1Q6IF63 320 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 TRAPPC6BQ86SZ2 158 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 ANGPTL5Q86XS5 388 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 DEFB107AQ8IZN7 70 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 OSR2Q8N2R0 312 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 BBS1Q8NFJ9 593 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 OR4P4Q8NGL7 312 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 ZNF596Q8TC21 504 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 GIPC3Q8TF64 312 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 RBM14Q96PK6 669 aaKnown RBP9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 PLEKHA1Q9HB21 404 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 DPM3Q9P2X0 92 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 IKZF2Q9UKS7 526 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 SLC7A11Q9UPY5 501 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 U3KQK5 164 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 V9GYS6 101 aa9.28□□□□□ -0.92
CTDNEP1-212ENST00000576613 FAM230AA0A1W2PPH8 454 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 TCRBV5S2A0A599 114 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 PSMB11A5LHX3 300 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 LEUTXA8MZ59 168 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 MRPL3P09001 348 aaKnown RBP9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 CCDC159P0C7I6 412 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 SLC2A5P22732 501 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 GABRR1P24046 479 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 LMO1P25800 156 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 CEACAM3P40198 252 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 THBS3P49746 956 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 MNAT1P51948 309 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 ACTR3P61158 418 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 DGCR2P98153 550 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 BDH1Q02338 343 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 MFGE8Q08431 387 aaPredicted RBP9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 GRK1Q15835 563 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 SNAPC1Q16533 368 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 C9orf152Q5JTZ5 239 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 C10orf99Q6UWK7 81 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 ETV3LQ6ZN32 361 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 RTN4RL2Q86UN3 420 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 ENTHD1Q8IYW4 607 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 TRMT10AQ8TBZ6 339 aaKnown RBP9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 BCAS4Q8TDM0 211 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 CREB3L1Q96BA8 519 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 GAL3ST2Q9H3Q3 398 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 ZNF556Q9HAH1 456 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 PAPOLBQ9NRJ5 636 aaKnown RBP9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 TAGLN3Q9UI15 199 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 GLS2Q9UI32 602 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 UBE2J1Q9Y385 318 aaPredicted RBP9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 PCDHGB5Q9Y5G0 923 aa9.27□□□□□ -0.93
CTDNEP1-212ENST00000576613 TMEM82A0PJX8 343 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 A6NIN4 97 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 C3orf84H3BNL1 204 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 HAND1O96004 215 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 OSMP13725 252 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 MNDAP41218 407 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 RPL23AP62750 156 aaKnown RBP9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 CDK5Q00535 292 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 CCDC144NLQ6NUI1 221 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 DHFR2Q86XF0 187 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 EGFL6Q8IUX8 553 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 Q8IYB0 196 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 ELMOD2Q8IZ81 293 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 ABHD12Q8N2K0 398 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 TPRX1Q8N7U7 411 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 OR14K1Q8NGZ2 314 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms