RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ZNF660Q6AZW8 331 aaPredicted RBP20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 APOBEC3DQ96AK3 386 aaPredicted RBP20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 RNF222A6NCQ9 220 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 COX5BP10606 129 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 PGAM2P15259 253 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 CD82P27701 267 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 WNT5AP41221 380 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 RTL6Q6ICC9 239 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 OR1K1Q8NGR3 316 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 SLAMF9Q96A28 289 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 WBP1Q96G27 269 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 DMRTA2Q96SC8 542 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 FAM86C1Q9NVL1 165 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 IL36GQ9NZH8 169 aa20.37■□□□□ 0.85
NPLOC4-217ENST00000574897 C3orf80F5H4A9 247 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 ARR3P36575 388 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 RBM11P57052 281 aaKnown RBP20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 IGFBP7Q16270 282 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 TOR2AQ5JU69 321 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 GCNT2Q8N0V5 402 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 MBD2Q9UBB5 411 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 A0A1W2PR80 420 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 PQLC2LA1A4F0 135 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 SS18L1O75177 396 aaPredicted RBP20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 BCL3P20749 454 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 PTGER4P35408 488 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 FBXW9Q5XUX1 488 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 TMEM65Q6PI78 240 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 CXorf58Q96LI9 332 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 C1QTNF6Q9BXI9 259 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 IL36RNQ9UBH0 155 aa20.36■□□□□ 0.85
NPLOC4-217ENST00000574897 B3GALNT1O75752 331 aa20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 RLN2P04090 185 aa20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 SLC25A4P12235 298 aa20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 HAAOP46952 286 aa20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 P2RX3P56373 397 aa20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 MALLQ13021 153 aa20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 OR6K3Q8NGY3 331 aa20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 SNAPC5O75971 98 aa20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 OR7C1O76099 320 aaPredicted RBP20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 OR5H8P0DN80 308 aa20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 PLP2Q04941 152 aa20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 THOC7Q6I9Y2 204 aaKnown RBP20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 MDP1Q86V88 176 aa20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 MYPOPQ86VE0 399 aaPredicted RBP20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 VRK1Q99986 396 aaPredicted RBP20.35■□□□□ 0.85
NPLOC4-217ENST00000574897 TEX46H3BTG2 121 aa20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 CRHP06850 196 aa20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 RFPL4BQ6ZWI9 263 aa20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 C5orf24Q7Z6I8 188 aa20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 BCL2L2Q92843 193 aaPredicted RBP20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 SCGB3A2Q96PL1 93 aa20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 TECTBQ96PL2 329 aa20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 ZFHX2Q9C0A1 2572 aaPredicted RBP20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 RRP8O43159 456 aaKnown RBP20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 NMBP08949 121 aa20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 SPATA46Q5T0L3 261 aa20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 CHMP1AQ9HD42 196 aaPredicted RBP20.34■□□□□ 0.85
NPLOC4-217ENST00000574897 AKAP13Q12802 2813 aa20.33■□□□□ 0.85
NPLOC4-217ENST00000574897 PDCD6O75340 191 aa20.33■□□□□ 0.85
NPLOC4-217ENST00000574897 RRASP10301 218 aa20.33■□□□□ 0.85
NPLOC4-217ENST00000574897 SLC22A25Q6T423 547 aa20.33■□□□□ 0.85
NPLOC4-217ENST00000574897 ZDHHC23Q8IYP9 409 aa20.33■□□□□ 0.85
NPLOC4-217ENST00000574897 KCNRGQ8N5I3 272 aa20.33■□□□□ 0.85
NPLOC4-217ENST00000574897 SCARB1Q8WTV0 552 aa20.33■□□□□ 0.85
NPLOC4-217ENST00000574897 MRPS24Q96EL2 167 aaKnown RBP20.33■□□□□ 0.85
NPLOC4-217ENST00000574897 OR10C1Q96KK4 312 aa20.33■□□□□ 0.85
NPLOC4-217ENST00000574897 ZNF732B4DXR9 585 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 ZNF250P15622 560 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 I3L521 148 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 CELA3BP08861 270 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 DTYMKP23919 212 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 APLNRP35414 380 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 P4HA3Q7Z4N8 544 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 SLC51BQ86UW2 128 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 RELL2Q8NC24 303 aaPredicted RBP20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 THAP6Q8TBB0 222 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 TOMM40LQ969M1 308 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 ZNF75AQ96N20 296 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 ZNF442Q9H7R0 627 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 EDARQ9UNE0 448 aa20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 C14orf166Q9Y224 244 aaKnown RBP20.32■□□□□ 0.84
NPLOC4-217ENST00000574897 CD300LBA8K4G0 201 aa20.31■□□□□ 0.84
NPLOC4-217ENST00000574897 H0YIZ8 118 aa20.31■□□□□ 0.84
NPLOC4-217ENST00000574897 HOXB5P09067 269 aa20.31■□□□□ 0.84
NPLOC4-217ENST00000574897 PSMB6P28072 239 aa20.31■□□□□ 0.84
NPLOC4-217ENST00000574897 CEACAM21Q3KPI0 293 aa20.31■□□□□ 0.84
NPLOC4-217ENST00000574897 MTCH1Q9NZJ7 389 aa20.31■□□□□ 0.84
NPLOC4-217ENST00000574897 A0A0D9SG52 128 aa20.31■□□□□ 0.84
NPLOC4-217ENST00000574897 SYNGR1O43759 233 aa20.31■□□□□ 0.84
NPLOC4-217ENST00000574897 AANATQ16613 207 aa20.31■□□□□ 0.84
NPLOC4-217ENST00000574897 ST8SIA2Q92186 375 aa20.31■□□□□ 0.84
NPLOC4-217ENST00000574897 KIF25Q9UIL4 384 aa20.31■□□□□ 0.84
NPLOC4-217ENST00000574897 FXYD4P59646 89 aa20.3■□□□□ 0.84
NPLOC4-217ENST00000574897 FAM74A1Q5RGS3 127 aa20.3■□□□□ 0.84
NPLOC4-217ENST00000574897 ZNF488Q96MN9 340 aa20.3■□□□□ 0.84
NPLOC4-217ENST00000574897 RNF126Q9BV68 326 aa20.3■□□□□ 0.84
NPLOC4-217ENST00000574897 METTL8Q9H825 291 aaKnown RBP20.3■□□□□ 0.84
NPLOC4-217ENST00000574897 NECAP2Q9NVZ3 263 aa20.3■□□□□ 0.84
NPLOC4-217ENST00000574897 CST4P01036 141 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms