RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SLAMF9Q96A28 289 aa12.09□□□□□ -0.47
VPS33B-208ENST00000574755 C13orf42A0A1B0GVH6 325 aa12.08□□□□□ -0.47
VPS33B-208ENST00000574755 FAM221AA4D161 298 aa12.08□□□□□ -0.47
VPS33B-208ENST00000574755 CD300LBA8K4G0 201 aa12.08□□□□□ -0.47
VPS33B-208ENST00000574755 RRP8O43159 456 aaKnown RBP12.08□□□□□ -0.47
VPS33B-208ENST00000574755 WISP2O76076 250 aa12.08□□□□□ -0.47
VPS33B-208ENST00000574755 CEACAM1P13688 526 aa12.08□□□□□ -0.47
VPS33B-208ENST00000574755 PGAM2P15259 253 aa12.08□□□□□ -0.47
VPS33B-208ENST00000574755 RAB14P61106 215 aa12.08□□□□□ -0.47
VPS33B-208ENST00000574755 SURF2Q15527 256 aaPredicted RBP12.08□□□□□ -0.47
VPS33B-208ENST00000574755 C11orf87Q6NUJ2 197 aa12.08□□□□□ -0.47
VPS33B-208ENST00000574755 HIST1H2AAQ96QV6 131 aa12.08□□□□□ -0.47
VPS33B-208ENST00000574755 FGF23Q9GZV9 251 aaPredicted RBP12.08□□□□□ -0.47
VPS33B-208ENST00000574755 C14orf166Q9Y224 244 aaKnown RBP12.08□□□□□ -0.47
VPS33B-208ENST00000574755 ZNF891A8MT65 544 aaPredicted RBP12.08□□□□□ -0.48
VPS33B-208ENST00000574755 ZNF732B4DXR9 585 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 KNG1P01042 644 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 OR5H8P0DN80 308 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 BCL3P20749 454 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 SUPT4H1P63272 117 aaKnown RBP12.08□□□□□ -0.48
VPS33B-208ENST00000574755 TGFBR3Q03167 851 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 GSG1LQ6UXU4 331 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 TFAP2EQ6VUC0 442 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 RFPL4BQ6ZWI9 263 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 FAM214BQ7L5A3 538 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 OR5L1Q8NGL2 311 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 OR5M9Q8NGP3 310 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 ZNF442Q9H7R0 627 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 NECAP2Q9NVZ3 263 aa12.08□□□□□ -0.48
VPS33B-208ENST00000574755 RPS10-NUDT3A0A1W2PQS6 291 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 ANKRD30BLA7E2S9 258 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 FUT3P21217 361 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 SERPINF1P36955 418 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 ECI1P42126 302 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 IKZF1Q13422 519 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 TBC1D28Q2M2D7 210 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 CLLU1Q5K131 121 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 COQ8AQ8NI60 647 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 GSX2Q9BZM3 304 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 RDH8Q9NYR8 311 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 PRR13Q9NZ81 148 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 KCNMB2Q9Y691 235 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 RIF1Q5UIP0 2472 aaKnown RBP12.07□□□□□ -0.48
VPS33B-208ENST00000574755 A0A1W2PR80 420 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 AQP7O14520 342 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 LYZL6O75951 148 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 IGHV1-2P23083 117 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 UBE2NP61088 152 aaKnown RBP12.07□□□□□ -0.48
VPS33B-208ENST00000574755 CNEP1R1Q8N9A8 125 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 OR5A2Q8NGI9 324 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 ZNF75AQ96N20 296 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 MICU1Q9BPX6 476 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 C12orf4Q9NQ89 552 aa12.07□□□□□ -0.48
VPS33B-208ENST00000574755 ZFHX2Q9C0A1 2572 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-208ENST00000574755 LINC00862A6NCI5 91 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 IL32P24001 234 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 ATXN7L3Q14CW9 347 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-208ENST00000574755 SPATA46Q5T0L3 261 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 TMEM65Q6PI78 240 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 SLC22A25Q6T423 547 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 SAXO1Q8IYX7 474 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 THAP6Q8TBB0 222 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 SARAFQ96BY9 339 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 LEUTXA8MZ59 168 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 TRAPPC2LH3BP13 241 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 LILRA1O75019 489 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 SLC25A4P12235 298 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 FGF12P61328 243 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 DAZAP2Q15038 168 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-208ENST00000574755 ANKRD55Q3KP44 614 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 NHLRC3Q5JS37 347 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 NSUN5P2Q63ZY6 315 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 ZNF660Q6AZW8 331 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-208ENST00000574755 MYPOPQ86VE0 399 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-208ENST00000574755 MKXQ8IYA7 352 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 Q8NFD4 153 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 ZNF286AQ9HBT8 521 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 CHMP1AQ9HD42 196 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-208ENST00000574755 RAB18Q9NP72 206 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 TNFSF18Q9UNG2 199 aa12.06□□□□□ -0.48
VPS33B-208ENST00000574755 LAMA5O15230 3695 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 A0A0D9SG52 128 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 F8VVB4 439 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 F8VWA3 439 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 ADAP1O75689 374 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 CELA3BP08861 270 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 RPS2P15880 293 aaKnown RBP12.05□□□□□ -0.48
VPS33B-208ENST00000574755 ZNF14P17017 642 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-208ENST00000574755 MRPL49Q13405 166 aaKnown RBP12.05□□□□□ -0.48
VPS33B-208ENST00000574755 ELP2Q6IA86 826 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 OR2T2Q6IF00 324 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 ALKAL2Q6UX46 152 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 Q6ZT83 130 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 TMEM200AQ86VY9 491 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 OR5P3Q8WZ94 311 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 POM121Q96HA1 1249 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 DLL3Q9NYJ7 618 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 MTCH1Q9NZJ7 389 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 MPC1Q9Y5U8 109 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 BOD1L1Q8NFC6 3051 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms