RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 HAVCR2Q8TDQ0 301 aa22.84■■□□□ 1.25
SCARF1-207ENST00000573867 GATAD2BQ8WXI9 593 aa22.84■■□□□ 1.25
SCARF1-207ENST00000573867 ZCCHC4Q9H5U6 513 aa22.84■■□□□ 1.25
SCARF1-207ENST00000573867 BABAM2Q9NXR7 383 aa22.84■■□□□ 1.25
SCARF1-207ENST00000573867 CNOT2Q9NZN8 540 aaKnown RBP22.84■■□□□ 1.25
SCARF1-207ENST00000573867 KPTNQ9Y664 436 aa22.84■■□□□ 1.25
SCARF1-207ENST00000573867 EFCAB10A6NFE3 127 aa22.83■■□□□ 1.25
SCARF1-207ENST00000573867 OGG1O15527 345 aa22.83■■□□□ 1.25
SCARF1-207ENST00000573867 SPRY1O43609 319 aaPredicted RBP22.83■■□□□ 1.25
SCARF1-207ENST00000573867 CCDC58Q4VC31 144 aa22.83■■□□□ 1.25
SCARF1-207ENST00000573867 LHFPL2Q6ZUX7 228 aa22.83■■□□□ 1.25
SCARF1-207ENST00000573867 AHSA2Q719I0 299 aa22.83■■□□□ 1.25
SCARF1-207ENST00000573867 TSEN15Q8WW01 171 aaKnown RBP22.83■■□□□ 1.25
SCARF1-207ENST00000573867 FKBP14Q9NWM8 211 aa22.83■■□□□ 1.25
SCARF1-207ENST00000573867 DHDHQ9UQ10 334 aa22.83■■□□□ 1.25
SCARF1-207ENST00000573867 IGKV1-12A0A0C4DH73 117 aa22.82■■□□□ 1.24
SCARF1-207ENST00000573867 IGKV1D-12P01611 117 aa22.82■■□□□ 1.24
SCARF1-207ENST00000573867 C21orf33P30042 268 aaPredicted RBP22.82■■□□□ 1.24
SCARF1-207ENST00000573867 SOX2P48431 317 aa22.82■■□□□ 1.24
SCARF1-207ENST00000573867 GPR157Q5UAW9 335 aa22.82■■□□□ 1.24
SCARF1-207ENST00000573867 VMO1Q7Z5L0 202 aa22.82■■□□□ 1.24
SCARF1-207ENST00000573867 ZNF561Q8N587 486 aa22.82■■□□□ 1.24
SCARF1-207ENST00000573867 LHX4Q969G2 390 aa22.82■■□□□ 1.24
SCARF1-207ENST00000573867 RBFOX1Q9NWB1 397 aaKnown RBP22.82■■□□□ 1.24
SCARF1-207ENST00000573867 H0YJX3 145 aa22.81■■□□□ 1.24
SCARF1-207ENST00000573867 ANGPTL7O43827 346 aa22.81■■□□□ 1.24
SCARF1-207ENST00000573867 CALCBP10092 127 aa22.81■■□□□ 1.24
SCARF1-207ENST00000573867 BCL3P20749 454 aa22.81■■□□□ 1.24
SCARF1-207ENST00000573867 PDZK1IP1Q13113 114 aa22.81■■□□□ 1.24
SCARF1-207ENST00000573867 KIR3DL3Q8N743 410 aa22.81■■□□□ 1.24
SCARF1-207ENST00000573867 ZFP41Q8N8Y5 198 aa22.81■■□□□ 1.24
SCARF1-207ENST00000573867 OR13C5Q8NGS8 318 aa22.81■■□□□ 1.24
SCARF1-207ENST00000573867 DMRTB1Q96MA1 342 aa22.81■■□□□ 1.24
SCARF1-207ENST00000573867 DUX5Q96PT3 197 aa22.81■■□□□ 1.24
SCARF1-207ENST00000573867 C19orf12Q9NSK7 152 aa22.81■■□□□ 1.24
SCARF1-207ENST00000573867 CAPZA1P52907 286 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 UBA52P62987 128 aaKnown RBP22.8■■□□□ 1.24
SCARF1-207ENST00000573867 COL10A1Q03692 680 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 PDCD1Q15116 288 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 DEFB112Q30KQ8 113 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 DMKNQ6E0U4 476 aaPredicted RBP22.8■■□□□ 1.24
SCARF1-207ENST00000573867 ZNF529Q6P280 563 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 SERPINA12Q8IW75 414 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 PDZD9Q8IXQ8 264 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 OR51A2Q8NGJ7 313 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 OR5D18Q8NGL1 313 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 ZFAND2BQ8WV99 257 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 EMG1Q92979 244 aaKnown RBP22.8■■□□□ 1.24
SCARF1-207ENST00000573867 SMIM19Q96E16 107 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 JMJD8Q96S16 334 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 SIRT7Q9NRC8 400 aa22.8■■□□□ 1.24
SCARF1-207ENST00000573867 ANK2Q01484 3957 aa22.79■■□□□ 1.24
SCARF1-207ENST00000573867 DNAJC9-AS1A6NH13 148 aa22.79■■□□□ 1.24
SCARF1-207ENST00000573867 SLC1A7O00341 560 aa22.79■■□□□ 1.24
SCARF1-207ENST00000573867 SULT1B1O43704 296 aa22.79■■□□□ 1.24
SCARF1-207ENST00000573867 ZNF737O75373 536 aa22.79■■□□□ 1.24
SCARF1-207ENST00000573867 ALX3O95076 343 aa22.79■■□□□ 1.24
SCARF1-207ENST00000573867 RPSAP08865 295 aaKnown RBP22.79■■□□□ 1.24
SCARF1-207ENST00000573867 MKXQ8IYA7 352 aa22.79■■□□□ 1.24
SCARF1-207ENST00000573867 GPR148Q8TDV2 347 aa22.79■■□□□ 1.24
SCARF1-207ENST00000573867 SGCDQ92629 289 aa22.79■■□□□ 1.24
SCARF1-207ENST00000573867 CHCHD3Q9NX63 227 aaKnown RBP22.79■■□□□ 1.24
SCARF1-207ENST00000573867 IGHV1-69DA0A0B4J2H0 117 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 A0A1W2PQ09 198 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 IGHV1-69P01742 117 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 TK1P04183 234 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 ZP1P60852 638 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 C6orf141Q5SZD1 244 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 FAM185AQ8N0U4 392 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 STX19Q8N4C7 294 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 OR5D14Q8NGL3 314 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 TNFRSF14Q92956 283 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 PGLYRP3Q96LB9 341 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 TAS2R4Q9NYW5 299 aa22.78■■□□□ 1.24
SCARF1-207ENST00000573867 TRBV23-1A0A0A0MS06 115 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 RNASEK-C17orf49H0YIS7 233 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 TRIM77I1YAP6 450 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 OCM2P0CE71 109 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 OCMP0CE72 109 aaPredicted RBP22.77■■□□□ 1.24
SCARF1-207ENST00000573867 DUSP1P28562 367 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 KLRD1Q13241 179 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 MED21Q13503 144 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 FAM58AQ8N1B3 248 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 OR4M1Q8NGD0 313 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 FAM216AQ8WUB2 273 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 GHSRQ92847 366 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 ORAI1Q96D31 301 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 PAK1IP1Q9NWT1 392 aaPredicted RBP22.77■■□□□ 1.24
SCARF1-207ENST00000573867 ZNF281Q9Y2X9 895 aa22.77■■□□□ 1.24
SCARF1-207ENST00000573867 TMEM82A0PJX8 343 aa22.76■■□□□ 1.23
SCARF1-207ENST00000573867 K7N7A8 449 aa22.76■■□□□ 1.23
SCARF1-207ENST00000573867 HCKP08631 526 aa22.76■■□□□ 1.23
SCARF1-207ENST00000573867 BPIFB3P59826 476 aa22.76■■□□□ 1.23
SCARF1-207ENST00000573867 RPS11P62280 158 aaKnown RBP eCLIP22.76■■□□□ 1.23
SCARF1-207ENST00000573867 BAMBIQ13145 260 aa22.76■■□□□ 1.23
SCARF1-207ENST00000573867 KISS1Q15726 138 aa22.76■■□□□ 1.23
SCARF1-207ENST00000573867 RBMS3Q6XE24 437 aaKnown RBP22.76■■□□□ 1.23
SCARF1-207ENST00000573867 Q8IYB0 196 aa22.76■■□□□ 1.23
SCARF1-207ENST00000573867 CMTM4Q8IZR5 234 aa22.76■■□□□ 1.23
SCARF1-207ENST00000573867 PIP4P2Q8N4L2 257 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms