RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SNAI3Q3KNW1 292 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 AADACL3Q5VUY0 350 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 SIAH3Q8IW03 269 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 C1orf162Q8NEQ5 155 aaPredicted RBP8.77□□□□□ -1.01
SMG6-213ENST00000573166 OR2T35Q8NGX2 323 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 ZNF471Q9BX82 626 aaPredicted RBP8.77□□□□□ -1.01
SMG6-213ENST00000573166 FAM234AQ9H0X4 552 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 SCPEP1Q9HB40 452 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 ATPIF1Q9UII2 106 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 ZNF106Q9H2Y7 1883 aaKnown RBP8.77□□□□□ -1.01
SMG6-213ENST00000573166 IGKV3D-15A0A087WSY6 115 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 F5H5P2 479 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 PEX14O75381 377 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 ADRA2AP08913 450 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 GSTP1P09211 210 aaKnown RBP8.77□□□□□ -1.01
SMG6-213ENST00000573166 TAS2R31P59538 309 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 DGCR2P98153 550 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 NECAP2Q9NVZ3 263 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 SLC23A1Q9UHI7 598 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 LAMP3Q9UQV4 416 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 PTPN13Q12923 2485 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 J3QT63 122 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 TM4SF5O14894 197 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 ENSAO43768 121 aaKnown RBP8.77□□□□□ -1.01
SMG6-213ENST00000573166 EPHA1P21709 976 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 SERPINF1P36955 418 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 CATR1Q13166 79 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 PRAMEF6Q5VXH4 476 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 BRICD5Q6PL45 260 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 RFPL4BQ6ZWI9 263 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 IQCF2Q8IXL9 164 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 PRSS35Q8N3Z0 413 aa8.77□□□□□ -1.01
SMG6-213ENST00000573166 RNASE6Q93091 150 aaKnown RBP8.77□□□□□ -1.01
SMG6-213ENST00000573166 PLEKHB1Q9UF11 243 aaPredicted RBP8.77□□□□□ -1.01
SMG6-213ENST00000573166 SDCBPO00560 298 aaPredicted RBP8.76□□□□□ -1.01
SMG6-213ENST00000573166 NUPL2O15504 423 aaKnown RBP8.76□□□□□ -1.01
SMG6-213ENST00000573166 TMEM127O75204 238 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 ALDH3B1P43353 468 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 KIR2DL2P43627 348 aaPredicted RBP8.76□□□□□ -1.01
SMG6-213ENST00000573166 MECP2P51608 486 aaKnown RBP8.76□□□□□ -1.01
SMG6-213ENST00000573166 H3F3AP84243 136 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 UBALD1Q8TB05 177 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 KLF14Q8TD94 323 aaPredicted RBP8.76□□□□□ -1.01
SMG6-213ENST00000573166 FBLIM1Q8WUP2 373 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 FBXW5Q969U6 566 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 PHB2Q99623 299 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 RIMS4Q9H426 269 aaPredicted RBP8.76□□□□□ -1.01
SMG6-213ENST00000573166 RNF7Q9UBF6 113 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 OR5V1Q9UGF6 321 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 MGAT4AQ9UM21 535 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 TRAV38-1A0A0B4J264 116 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 MPPED1O15442 326 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 ZNF728P0DKX0 622 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 PSMB1P20618 241 aaKnown RBP8.76□□□□□ -1.01
SMG6-213ENST00000573166 FOXG1P55316 489 aaPredicted RBP8.76□□□□□ -1.01
SMG6-213ENST00000573166 PLAURQ03405 335 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 GABRA6Q16445 453 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 TMEM91Q6ZNR0 172 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 GABRG1Q8N1C3 465 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 OR4D6Q8NGJ1 314 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 SRRQ9GZT4 340 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 CHST6Q9GZX3 395 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 TAS2R3Q9NYW6 316 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 NUBP2Q9Y5Y2 271 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 MYO18BQ8IUG5 2567 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 TRGV10A0A0A0MS01 117 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 SERPINE3A8MV23 424 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 CTXN2P0C2S0 81 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 IL3RAP26951 378 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 CEBPGP53567 150 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 GNMTQ14749 295 aa8.76□□□□□ -1.01
SMG6-213ENST00000573166 ANKHD1Q8IWZ3 2542 aaKnown RBP8.76□□□□□ -1.01
SMG6-213ENST00000573166 A0A0A6YYH2 397 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 TMEM82A0PJX8 343 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 A6NJ64 397 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 TMPRSS2O15393 492 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 TUSC2O75896 110 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 TUBG1P23258 451 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 CD40P25942 277 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 NPY4RP50391 375 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 GNB2P62879 340 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 RBMS2Q15434 407 aaKnown RBP8.75□□□□□ -1.01
SMG6-213ENST00000573166 IGFBP7Q16270 282 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 NRN1LQ496H8 165 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 OR2W3Q7Z3T1 314 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 ST6GALNAC3Q8NDV1 305 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 ARHGAP5-AS1Q96IT6 56 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 ST6GAL2Q96JF0 529 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 TUBG2Q9NRH3 451 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 FAM206AQ9NX38 181 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 F5H0A9 414 aaPredicted RBP8.75□□□□□ -1.01
SMG6-213ENST00000573166 K7EM74 188 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 XRCC3O43542 346 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 SLC22A5O76082 557 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 APOC3P02656 99 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 RPS2P15880 293 aaKnown RBP8.75□□□□□ -1.01
SMG6-213ENST00000573166 RFX2P48378 723 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 FAM76BQ5HYJ3 339 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 METTL11BQ5VVY1 283 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 LPCAT3Q6P1A2 487 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms