RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PIK3C2GO75747 1445 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 TRAV39A0A0B4J263 110 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 A0A1B0GV50 99 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 MAP1LC3B2A6NCE7 125 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 MSGN1A6NI15 193 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 C5orf58C9J3I9 102 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 INAFM1C9JVW0 142 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 NPIPB9F8W1W9 429 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 H7C1H1 209 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 I3L4J1 428 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 J3QT63 122 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 TXNDC9O14530 226 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 CCDC22O60826 627 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 SELEP16581 610 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 MIPP30301 263 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 PSMD8P48556 350 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 HBG1P69891 147 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 HBG2P69892 147 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 NSDHLQ15738 373 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 BATFQ16520 125 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 VMACQ2NL98 169 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF684Q5T5D7 378 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 C9orf64Q5T6V5 341 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 FBXW9Q5XUX1 488 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 SLC18B1Q6NT16 456 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 LPCAT3Q6P1A2 487 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 HOGA1Q86XE5 327 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF843Q8N446 348 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF614Q8N883 585 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 OR10G7Q8NGN6 311 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 OR9Q1Q8NGQ5 310 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 OR5J2Q8NH18 312 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNRF2Q8NHG8 242 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 LNX1Q8TBB1 728 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 AGAP11Q8TF27 550 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 SSC4DQ8WTU2 575 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 C11orf52Q96A22 123 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 PDXPQ96GD0 296 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 DNAJC30Q96LL9 226 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 HIST1H4GQ99525 98 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 CCDC32Q9BV29 185 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 MAP1LC3BQ9GZQ8 125 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 OR51I2Q9H344 312 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 LIME1Q9H400 295 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 POMKQ9H5K3 350 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 ZDHHC11Q9H8X9 412 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 PANK3Q9H999 370 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 CISHQ9NSE2 258 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 DMAC2Q9NW81 257 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 COPZ2Q9P299 210 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 SS18L2Q9UHA2 77 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF223Q9UK11 482 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 V9GY05 133 aa4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 SMG6Q86US8 1419 aaKnown RBP4.04□□□□□ -1.76
TOPBP1-210ENST00000572787 FAM172BPA6NC97 362 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 E7EQ34 232 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 TRAPPC2LH3BP13 241 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 K7ENP7 123 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 FAAHO00519 579 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 SERPINB7O75635 380 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 YIF1AO95070 293 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 IGKV1D-16P01601 117 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 TTRP02766 147 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 IGKV5-2P06315 115 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 PRSS1P07477 247 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 PRSS2P07478 247 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 GABRA1P14867 456 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 TCN2P20062 427 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 MARK3P27448 753 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 AGTR1P30556 359 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 CDKN2BP42772 138 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 MAP2K4P45985 399 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 REG1BP48304 166 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF133P52736 654 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 DNAJB13P59910 316 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 TPI1P60174 286 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 CKS1BP61024 79 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 TBPL1P62380 186 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 DYNLL1P63167 89 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 ELF3P78545 371 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF266Q14584 549 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 RBMS2Q15434 407 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 PLPPR5Q32ZL2 321 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 TMEM255AQ5JRV8 349 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 FAM162BQ5T6X4 162 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 Q6YL49 198 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 LRRTM1Q86UE6 522 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 NAA40Q86UY6 237 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 CARM1Q86X55 608 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 UBALD2Q8IYN6 164 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 SLC35F6Q8N357 371 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 NPWQ8N729 165 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF491Q8N8L2 437 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 ZFP41Q8N8Y5 198 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 ST6GALNAC3Q8NDV1 305 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 OR51A2Q8NGJ7 313 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 OR10D3Q8NH80 312 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 RXFP2Q8WXD0 754 aa4.03□□□□□ -1.76
TOPBP1-210ENST00000572787 ACY3Q96HD9 319 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms