RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 F8VWA3 439 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 H0YHG0 523 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 C3orf84H3BNL1 204 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 PRODHO43272 600 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 MMP23AO75900 390 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 INMTO95050 263 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 ATP6V1B2P21281 511 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 BRS3P32247 399 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 CBX1P83916 185 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 DGCR2P98153 550 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 MEF2CQ06413 473 aaPredicted RBP15.77■□□□□ 0.12
CCDC40-206ENST00000572083 NKAPLQ5M9Q1 402 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 LCN1P1Q5VSP4 162 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 TMEM42Q69YG0 159 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 BAIAP2L2Q6UXY1 529 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 C8orf86Q6ZUL3 223 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 ZNF329Q86UD4 541 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 CPOQ8IVL8 374 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 PGAM4Q8N0Y7 254 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 OR10G2Q8NGC3 310 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 TRMT10AQ8TBZ6 339 aaKnown RBP15.77■□□□□ 0.12
CCDC40-206ENST00000572083 RBM14Q96PK6 669 aaKnown RBP15.77■□□□□ 0.12
CCDC40-206ENST00000572083 REEP1Q9H902 201 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 NUFIP1Q9UHK0 495 aaKnown RBP15.77■□□□□ 0.12
CCDC40-206ENST00000572083 GTF2A1LQ9UNN4 478 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 LINC00312Q9Y6C7 94 aa15.77■□□□□ 0.12
CCDC40-206ENST00000572083 PSMB11A5LHX3 300 aa15.76■□□□□ 0.11
CCDC40-206ENST00000572083 FAM172BPA6NC97 362 aa15.76■□□□□ 0.11
CCDC40-206ENST00000572083 MRPL3P09001 348 aaKnown RBP15.76■□□□□ 0.11
CCDC40-206ENST00000572083 RPL23AP62750 156 aaKnown RBP15.76■□□□□ 0.11
CCDC40-206ENST00000572083 KCTD18Q6PI47 426 aaPredicted RBP15.76■□□□□ 0.11
CCDC40-206ENST00000572083 UNQ9370/PRO34162Q6UXP9 181 aa15.76■□□□□ 0.11
CCDC40-206ENST00000572083 ZBTB49Q6ZSB9 765 aa15.76■□□□□ 0.11
CCDC40-206ENST00000572083 ITFG2Q969R8 447 aa15.76■□□□□ 0.11
CCDC40-206ENST00000572083 MROQ9BYG7 248 aa15.76■□□□□ 0.11
CCDC40-206ENST00000572083 CHST6Q9GZX3 395 aa15.76■□□□□ 0.11
CCDC40-206ENST00000572083 TENM2Q9NT68 2774 aa15.76■□□□□ 0.11
CCDC40-206ENST00000572083 NUDT19A8MXV4 375 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 DLGAP1O14490 977 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 IGHA1P01876 353 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 TTRP02766 147 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 IL24Q13007 206 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 ZNF829Q3KNS6 432 aaPredicted RBP15.75■□□□□ 0.11
CCDC40-206ENST00000572083 OR2T5Q6IEZ7 315 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 CD300LDQ6UXZ3 194 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 OR2W3Q7Z3T1 314 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 OR2T29Q8NH02 315 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 SNX22Q96L94 193 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 PKIBQ9C010 78 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 DPM3Q9P2X0 92 aa15.75■□□□□ 0.11
CCDC40-206ENST00000572083 SLC2A5P22732 501 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 GABRR1P24046 479 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 APOFQ13790 326 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 GINS1Q14691 196 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 GRK1Q15835 563 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 SNAPC1Q16533 368 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 SLC35D3Q5M8T2 416 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 PRAMEF5Q5TYX0 476 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 DEGS2Q6QHC5 323 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 TRAPPC6BQ86SZ2 158 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 ABHD12Q8N2K0 398 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 OR52N4Q8NGI2 321 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 SLAMF9Q96A28 289 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 CEP19Q96LK0 163 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 FEVQ99581 238 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 ASCL2Q99929 193 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 CADM1Q9BY67 442 aaKnown RBP15.74■□□□□ 0.11
CCDC40-206ENST00000572083 YIPF3Q9GZM5 350 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 ARGLU1Q9NWB6 273 aaPredicted RBP15.74■□□□□ 0.11
CCDC40-206ENST00000572083 MTCH1Q9NZJ7 389 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 IL36RNQ9UBH0 155 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 IKZF2Q9UKS7 526 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.74■□□□□ 0.11
CCDC40-206ENST00000572083 V9GYS6 101 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 DNAH1Q9P2D7 4330 aa15.74■□□□□ 0.11
CCDC40-206ENST00000572083 BIRC6Q9NR09 4857 aa15.73■□□□□ 0.11
CCDC40-206ENST00000572083 FAM230AA0A1W2PPH8 454 aa15.73■□□□□ 0.11
CCDC40-206ENST00000572083 ARHGDIBP52566 201 aa15.73■□□□□ 0.11
CCDC40-206ENST00000572083 RIDAP52758 137 aaKnown RBP15.73■□□□□ 0.11
CCDC40-206ENST00000572083 KLHL22Q53GT1 634 aa15.73■□□□□ 0.11
CCDC40-206ENST00000572083 ZNF679Q8IYX0 411 aa15.73■□□□□ 0.11
CCDC40-206ENST00000572083 KLHL30-AS1Q8NEE0 82 aa15.73■□□□□ 0.11
CCDC40-206ENST00000572083 DUX3Q96PT4 197 aa15.73■□□□□ 0.11
CCDC40-206ENST00000572083 PRR25Q96S07 402 aa15.73■□□□□ 0.11
CCDC40-206ENST00000572083 DNAJB9Q9UBS3 223 aa15.73■□□□□ 0.11
CCDC40-206ENST00000572083 COPS3Q9UNS2 423 aa15.73■□□□□ 0.11
CCDC40-206ENST00000572083 LSM4Q9Y4Z0 139 aaKnown RBP15.73■□□□□ 0.11
CCDC40-206ENST00000572083 TCRBV5S2A0A599 114 aa15.72■□□□□ 0.11
CCDC40-206ENST00000572083 HAND1O96004 215 aa15.72■□□□□ 0.11
CCDC40-206ENST00000572083 PEX2P28328 305 aa15.72■□□□□ 0.11
CCDC40-206ENST00000572083 BDH1Q02338 343 aa15.72■□□□□ 0.11
CCDC40-206ENST00000572083 BCL2L15Q5TBC7 163 aa15.72■□□□□ 0.11
CCDC40-206ENST00000572083 OR14K1Q8NGZ2 314 aa15.72■□□□□ 0.11
CCDC40-206ENST00000572083 NOL4LQ96MY1 436 aaPredicted RBP15.72■□□□□ 0.11
CCDC40-206ENST00000572083 P2RX4Q99571 388 aa15.72■□□□□ 0.11
CCDC40-206ENST00000572083 PAPOLBQ9NRJ5 636 aaKnown RBP15.72■□□□□ 0.11
CCDC40-206ENST00000572083 ACTR3BQ9P1U1 418 aa15.72■□□□□ 0.11
CCDC40-206ENST00000572083 ZMAT5Q9UDW3 170 aaKnown RBP15.72■□□□□ 0.11
CCDC40-206ENST00000572083 HHLA2Q9UM44 414 aa15.72■□□□□ 0.11
CCDC40-206ENST00000572083 LEUTXA8MZ59 168 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms