RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 PRODH2Q9UF12 536 aa2.93□□□□□ -1.94
UBR1-211ENST00000569971 TBC1D24Q9ULP9 559 aa2.93□□□□□ -1.94
UBR1-211ENST00000569971 V9GYH0 126 aa2.93□□□□□ -1.94
UBR1-211ENST00000569971 CENPFP49454 3210 aa2.93□□□□□ -1.94
UBR1-211ENST00000569971 ATG2AQ2TAZ0 1938 aa2.93□□□□□ -1.94
UBR1-211ENST00000569971 TRPM6Q9BX84 2022 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 IGHV3OR16-12A0A075B7B8 117 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 TRAV27A0A087WT01 109 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 TRAV1-2A0A0B4J238 106 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 A0A0B4J2E0 115 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 FAM240BA0A1B0GVZ2 78 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 A0A1B0GX12 115 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 SHISA9B4DS77 424 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 ZNF879B4DU55 563 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 NPIPA7E9PJI5 369 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 J3QLW9 94 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 J3QRE1 110 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 PDCD5O14737 125 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 LRRTM2O43300 516 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 ORC5O43913 435 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 HPGDSO60760 199 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 DNAJB6O75190 326 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 TRIM3O75382 744 aaPredicted RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 REM1O75628 298 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 GATBO75879 557 aaKnown RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 OR7A10O76100 309 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 VENTXO95231 258 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 LYPD3O95274 346 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 NSA2O95478 260 aaKnown RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 SLC2A10O95528 541 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 LALBAP00709 142 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 CA1P00915 261 aaPredicted RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 CSTAP01040 98 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 HLA-DQB1P01920 261 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 IGHV4-34P06331 123 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 MELTFP08582 738 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 MRPL3P09001 348 aaKnown RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 TACSTD2P09758 323 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 CSF3P09919 207 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 CT62P0C5K7 136 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 NPIPA8P0DM63 369 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 RPS2P15880 293 aaKnown RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 ZNF19P17023 458 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 TBXA2RP21731 343 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 HLA-DMAP28067 261 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 DDOSTP39656 456 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 CD79BP40259 229 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 CAPZBP47756 277 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 OR1D4P47884 311 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 TGM4P49221 684 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 EVX1P49640 407 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 VEGFCP49767 419 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 RAB25P57735 213 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 PRPS1P60891 318 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 IGLV3-21P80748 117 aaPredicted RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 CSTF1Q05048 431 aaKnown RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 C1orf61Q13536 156 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 FAM53BQ14153 422 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 CRMP1Q14194 572 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 FZD2Q14332 565 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 GGTLC2Q14390 218 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 PON3Q15166 354 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 KCNJ8Q15842 424 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 ZNF141Q15928 474 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 ZNF79Q15937 498 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 ISXQ2M1V0 245 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 DEFB110Q30KQ9 67 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 NHLRC3Q5JS37 347 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 TMEM31Q5JXX7 168 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 IDNKQ5T6J7 187 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 ZNF57Q68EA5 555 aaPredicted RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 HBMQ6B0K9 141 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 TMEM225Q6GV28 225 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 ARL9Q6T311 187 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 ZNF497Q6ZNH5 498 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 LRRC28Q86X40 367 aaPredicted RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 RDH10Q8IZV5 341 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 SLC22A18ASQ8N1D0 253 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 SYS1Q8N2H4 156 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 Q8N377 158 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 ARIH2OSQ8N7S6 290 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 CSNK1G2-AS1Q8NCQ2 148 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 BHLHE23Q8NDY6 225 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 TSTD1Q8NFU3 115 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 STXBP6Q8NFX7 210 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 OR2T27Q8NH04 317 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 HAVCR2Q8TDQ0 301 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 LMX1AQ8TE12 382 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 DOK4Q8TEW6 326 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 CAPSLQ8WWF8 208 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 PATE1Q8WXA2 126 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 PIGCQ92535 297 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 PELI1Q96FA3 418 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 C9orf85Q96MD7 179 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 TGM7Q96PF1 710 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 ERMAPQ96PL5 475 aaPredicted RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 CNN2Q99439 309 aaKnown RBP2.92□□□□□ -1.94
UBR1-211ENST00000569971 TBX5Q99593 518 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 CTRCQ99895 268 aa2.92□□□□□ -1.94
UBR1-211ENST00000569971 TMEM43Q9BTV4 400 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms