RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ZFAND2BQ8WV99 257 aa11.4□□□□□ -0.58
HERPUD1-218ENST00000569569 TSEN15Q8WW01 171 aaKnown RBP11.4□□□□□ -0.58
HERPUD1-218ENST00000569569 GATAD2BQ8WXI9 593 aa11.4□□□□□ -0.58
HERPUD1-218ENST00000569569 SLAMF9Q96A28 289 aa11.4□□□□□ -0.58
HERPUD1-218ENST00000569569 TBX15Q96SF7 602 aa11.4□□□□□ -0.58
HERPUD1-218ENST00000569569 SIRPDQ9H106 197 aa11.4□□□□□ -0.58
HERPUD1-218ENST00000569569 VCX3BQ9H321 246 aa11.4□□□□□ -0.58
HERPUD1-218ENST00000569569 OR14J1Q9UGF5 321 aa11.4□□□□□ -0.58
HERPUD1-218ENST00000569569 IGHV3OR16-10A0A075B7F0 116 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 F8VVB4 439 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 F8VWA3 439 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 TRIM77I1YAP6 450 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 INMTO95050 263 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 POU3F4P49335 361 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 CAPZA1P52907 286 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 PDZK1IP1Q13113 114 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 AHSA2Q719I0 299 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 CMTM4Q8IZR5 234 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 GPR148Q8TDV2 347 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 SMIM19Q96E16 107 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 C19orf24Q9BVV8 132 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 ONECUT1Q9UBC0 465 aa11.39□□□□□ -0.59
HERPUD1-218ENST00000569569 TRBV23-1A0A0A0MS06 115 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 CENPVL3A0A0U1RRI6 287 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 A0A1W2PQ09 198 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 SULT1B1O43704 296 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 LALBAP00709 142 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 CD2P06729 351 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 CHRM2P08172 466 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 C21orf33P30042 268 aaPredicted RBP11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 CEBPDP49716 269 aaPredicted RBP11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 C6orf141Q5SZD1 244 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 C1orf122Q6ZSJ8 110 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 KIR3DL3Q8N743 410 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 SIGLECL1Q8N7X8 197 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 ZNF485Q8NCK3 441 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 RGP1Q92546 391 aaPredicted RBP11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 EMG1Q92979 244 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 FAM234AQ9H0X4 552 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 SEBOXQ9HB31 216 aaPredicted RBP11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 FKBP14Q9NWM8 211 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 ZNF281Q9Y2X9 895 aa11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 SIRT4Q9Y6E7 314 aaPredicted RBP11.38□□□□□ -0.59
HERPUD1-218ENST00000569569 MYL12BO14950 172 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 SPRY1O43609 319 aaPredicted RBP11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 TK1P04183 234 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 HCKP08631 526 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 RAB3AP20336 220 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 BCL3P20749 454 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 NPBWR2P48146 333 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 SOX2P48431 317 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 TAS2R43P59537 309 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 DMKNQ6E0U4 476 aaPredicted RBP11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 FIP1L1Q6UN15 594 aaKnown RBP11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 BRD3OSQ6XYD6 125 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 VMO1Q7Z5L0 202 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 FAM58AQ8N1B3 248 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 NANOGP1Q8N7R0 232 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 ZDHHC22Q8N966 263 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 LHX4Q969G2 390 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 RFT1Q96AA3 541 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 ZNF48Q96MX3 618 aaPredicted RBP11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 SPACA5Q96QH8 159 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 ELL3Q9HB65 397 aaPredicted RBP11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 RHOFQ9HBH0 211 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 ESM1Q9NQ30 184 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 SCN3BQ9NY72 215 aa11.37□□□□□ -0.59
HERPUD1-218ENST00000569569 PTGES3LE9PB15 166 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 K7N7A8 449 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 M0R1W7 72 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 MAGEB3O15480 346 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 MYF6P23409 242 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 WNT4P56705 351 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 RPL31P62899 125 aaKnown RBP11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 COL10A1Q03692 680 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 RIPK1Q13546 671 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 BLMHQ13867 455 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 ZNF146Q15072 292 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 KISS1Q15726 138 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 YIF1BQ5BJH7 314 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 RNLSQ5VYX0 342 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 ZNF529Q6P280 563 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 CRIP3Q6Q6R5 217 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 METAP1DQ6UB28 335 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 RNF144BQ7Z419 303 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 SAXO1Q8IYX7 474 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 Q8N7P7 452 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 ASCC1Q8N9N2 400 aaKnown RBP11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 ZSCAN4Q8NAM6 433 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 TBC1D15Q8TC07 691 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 FAM216AQ8WUB2 273 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 GHSRQ92847 366 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 MYDGFQ969H8 173 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 TMEM106AQ96A25 262 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 CPNE2Q96FN4 548 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 RBFOX1Q9NWB1 397 aaKnown RBP11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 GLS2Q9UI32 602 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 ERGIC3Q9Y282 383 aa11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 SOX21Q9Y651 276 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-218ENST00000569569 IGHV1-69DA0A0B4J2H0 117 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms