RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 TMEM42Q69YG0 159 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 C18orf65Q6ZTR6 163 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 MRPL41Q8IXM3 137 aaKnown RBP12.34□□□□□ -0.43
PALB2-205ENST00000567003 OR4X2Q8NGF9 303 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 OR4P4Q8NGL7 312 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 GIPC3Q8TF64 312 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 SLAMF9Q96A28 289 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 SLC25A33Q9BSK2 321 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 CHST6Q9GZX3 395 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 ACTR3BQ9P1U1 418 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 IKZF2Q9UKS7 526 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 KIAA2026Q5HYC2 2103 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 CCDC182A6NF36 153 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 DUS4LO95620 317 aaKnown RBP12.33□□□□□ -0.44
PALB2-205ENST00000567003 IGHA1P01876 353 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 AMY1AP04745 511 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 AMY2AP04746 511 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 C9orf152Q5JTZ5 239 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 SLC35D3Q5M8T2 416 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 TMEM236Q5W0B7 351 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 KCTD18Q6PI47 426 aaPredicted RBP12.33□□□□□ -0.44
PALB2-205ENST00000567003 OR8H2Q8N162 312 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 RNF166Q96A37 237 aaPredicted RBP12.33□□□□□ -0.44
PALB2-205ENST00000567003 CLEC7AQ9BXN2 247 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 CADM1Q9BY67 442 aaKnown RBP12.33□□□□□ -0.44
PALB2-205ENST00000567003 MROQ9BYG7 248 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 YIPF3Q9GZM5 350 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 TMEM133Q9H2Q1 129 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 MAGIXQ9H6Y5 334 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 TAGLN3Q9UI15 199 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 V9GYS6 101 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 DNAH1Q9P2D7 4330 aa12.33□□□□□ -0.44
PALB2-205ENST00000567003 A0A1B0GTI1 187 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 FAM230AA0A1W2PPH8 454 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 SRSF10O75494 262 aaKnown RBP12.32□□□□□ -0.44
PALB2-205ENST00000567003 CLIC3O95833 236 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 RIDAP52758 137 aaKnown RBP12.32□□□□□ -0.44
PALB2-205ENST00000567003 ZNF829Q3KNS6 432 aaPredicted RBP12.32□□□□□ -0.44
PALB2-205ENST00000567003 PRAMEF5Q5TYX0 476 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 C16orf89Q6UX73 402 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 ZNF679Q8IYX0 411 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 HS3ST5Q8IZT8 346 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 OR52N4Q8NGI2 321 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 OR14K1Q8NGZ2 314 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 CAPSLQ8WWF8 208 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 DPF1Q92782 380 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 APOL4Q9BPW4 351 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 CHID1Q9BWS9 393 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 PKIBQ9C010 78 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 LIN7BQ9HAP6 207 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 MTCH1Q9NZJ7 389 aa12.32□□□□□ -0.44
PALB2-205ENST00000567003 IGKV1-27A0A075B6S5 117 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 hADV38S2A0JD32 116 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 LOC110117498-PIK3R3F6TDL0 507 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 DLGAP1O14490 977 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 DNAJC8O75937 253 aaPredicted RBP12.31□□□□□ -0.44
PALB2-205ENST00000567003 CALCBP10092 127 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 HTR1DP28221 377 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 SNU13P55769 128 aaKnown RBP12.31□□□□□ -0.44
PALB2-205ENST00000567003 ROM1Q03395 351 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 MEF2CQ06413 473 aaPredicted RBP12.31□□□□□ -0.44
PALB2-205ENST00000567003 IL24Q13007 206 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 GRK1Q15835 563 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 ODF4Q2M2E3 257 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 BCL2L15Q5TBC7 163 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 DEGS2Q6QHC5 323 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 C16orf82Q7Z2V1 217 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 RNF144BQ7Z419 303 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 SNX22Q96L94 193 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 CEP19Q96LK0 163 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 LINC00312Q9Y6C7 94 aa12.31□□□□□ -0.44
PALB2-205ENST00000567003 EPPK1P58107 5090 aaKnown RBP12.31□□□□□ -0.44
PALB2-205ENST00000567003 SNX3O60493 162 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 HAND1O96004 215 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 HMGN1P05114 100 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 GABRR1P24046 479 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 DUSP1P28562 367 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 GDNFP39905 211 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 CBX1P83916 185 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 CDK5Q00535 292 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 MS4A2Q01362 244 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 IL18R1Q13478 541 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 FAM98BQ52LJ0 330 aaKnown RBP12.3□□□□□ -0.44
PALB2-205ENST00000567003 TRAPPC6BQ86SZ2 158 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 ZNF329Q86UD4 541 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 DHFR2Q86XF0 187 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 EMG1Q92979 244 aaKnown RBP12.3□□□□□ -0.44
PALB2-205ENST00000567003 STMN2Q93045 179 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 RBM14Q96PK6 669 aaKnown RBP12.3□□□□□ -0.44
PALB2-205ENST00000567003 OR52A1Q9UKL2 312 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 R4GMQ9 66 aa12.3□□□□□ -0.44
PALB2-205ENST00000567003 M0R129 80 aa12.29□□□□□ -0.44
PALB2-205ENST00000567003 PSPNO60542 156 aa12.29□□□□□ -0.44
PALB2-205ENST00000567003 ZNF254O75437 659 aa12.29□□□□□ -0.44
PALB2-205ENST00000567003 OR2F2O95006 317 aa12.29□□□□□ -0.44
PALB2-205ENST00000567003 CST1P01037 141 aa12.29□□□□□ -0.44
PALB2-205ENST00000567003 OSMP13725 252 aa12.29□□□□□ -0.44
PALB2-205ENST00000567003 THBS3P49746 956 aa12.29□□□□□ -0.44
PALB2-205ENST00000567003 UTF1Q5T230 341 aa12.29□□□□□ -0.44
PALB2-205ENST00000567003 LCN1P1Q5VSP4 162 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms